Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 AL353193.1-201ENST00000421444 268 ntBASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 AC008072.1-201ENST00000434254 824 ntBASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 AL392003.1-201ENST00000434394 243 ntBASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 RPL23AP28-201ENST00000448062 470 ntBASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 RGS5-217ENST00000451759 835 ntTSL 3 BASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 AC244505.3-201ENST00000454598 187 ntBASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 UBTFL6-201ENST00000477929 1024 ntBASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 MTND1P3-201ENST00000484956 952 ntBASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 AC117395.1-201ENST00000487390 403 ntBASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 RN7SL283P-201ENST00000489055 303 ntBASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 AC093664.1-201ENST00000511779 289 ntBASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 AC130364.2-201ENST00000528639 604 ntBASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 AC140063.1-201ENST00000541343 259 ntBASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 MIR4502-201ENST00000580432 81 ntBASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 NUTF2P8-201ENST00000604593 363 ntBASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 AC093788.1-201ENST00000609356 927 ntBASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 USP46-202ENST00000451218 4622 ntTSL 5 BASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 AL451064.2-201ENST00000623514 1654 ntBASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 AC241584.2-201ENST00000637142 2090 ntBASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 MELK-211ENST00000545008 2236 ntTSL 2 BASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 CASC19-243ENST00000641588 1546 ntBASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 RNU6-931P-201ENST00000363850 107 ntBASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 RNU1-55P-201ENST00000365510 158 ntBASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 MRPS6P2-201ENST00000381143 370 ntBASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 SNORA40.2-201ENST00000390847 128 ntBASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 RNU6-780P-201ENST00000391030 104 ntBASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 AL592293.2-201ENST00000422292 996 ntBASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 TXNP2-201ENST00000443918 295 ntBASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 AC022364.2-201ENST00000457963 554 ntBASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 RPL7AP23-201ENST00000482625 776 ntBASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 AC019235.1-201ENST00000503847 207 ntBASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 AC006499.5-201ENST00000505037 514 ntBASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 OR51A1P-201ENST00000511110 946 ntBASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 ELOCP31-201ENST00000540463 467 ntBASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 RPL3P13-201ENST00000550415 216 ntBASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 DNAJC8P1-201ENST00000554535 372 ntBASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 FAM60CP-201ENST00000591086 664 ntBASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 AC010487.1-201ENST00000594408 1172 ntBASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 AC116563.2-201ENST00000624751 535 ntBASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 AL359195.2-201ENST00000623657 4412 ntBASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 AC013488.1-201ENST00000526618 1838 ntBASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PDZRN3Q9UPQ7 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 LRRC37A16P-202ENST00000586022 3725 ntBASIC8.43□□□□□ -1.06
PDZRN3Q9UPQ7 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms