Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.49□□□□□ -1.53
PACSIN3Q9UKS6 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.49□□□□□ -1.53
PACSIN3Q9UKS6 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.49□□□□□ -1.53
PACSIN3Q9UKS6 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PACSIN3Q9UKS6 MTCO3P22-201ENST00000603219 784 ntBASIC5.49□□□□□ -1.53
PACSIN3Q9UKS6 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PACSIN3Q9UKS6 AL031601.1-201ENST00000605702 394 ntBASIC5.49□□□□□ -1.53
PACSIN3Q9UKS6 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
PACSIN3Q9UKS6 AC092794.1-201ENST00000612734 582 ntBASIC5.49□□□□□ -1.53
PACSIN3Q9UKS6 AC245014.3-201ENST00000618589 347 ntBASIC5.49□□□□□ -1.53
PACSIN3Q9UKS6 AL158062.1-201ENST00000619632 745 ntBASIC5.49□□□□□ -1.53
PACSIN3Q9UKS6 AC018755.4-201ENST00000619715 454 ntBASIC5.49□□□□□ -1.53
PACSIN3Q9UKS6 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
PACSIN3Q9UKS6 AC009120.7-201ENST00000623452 780 ntBASIC5.49□□□□□ -1.53
PACSIN3Q9UKS6 AL354854.1-201ENST00000455940 1363 ntBASIC5.49□□□□□ -1.53
PACSIN3Q9UKS6 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PACSIN3Q9UKS6 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PACSIN3Q9UKS6 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PACSIN3Q9UKS6 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PACSIN3Q9UKS6 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.49□□□□□ -1.53
PACSIN3Q9UKS6 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.49□□□□□ -1.53
PACSIN3Q9UKS6 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
PACSIN3Q9UKS6 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
PACSIN3Q9UKS6 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.49□□□□□ -1.53
PACSIN3Q9UKS6 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.49□□□□□ -1.53
PACSIN3Q9UKS6 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 KARSP3-201ENST00000571212 1504 ntBASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 RNFT1P3-201ENST00000340898 1052 ntBASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 OR5H15-201ENST00000383696 930 ntBASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 RNA5SP122-201ENST00000384457 108 ntBASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 ST13P16-201ENST00000401760 781 ntBASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 ELOCP17-201ENST00000414751 326 ntBASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 MTND4LP21-201ENST00000415303 295 ntBASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 MTND4P20-201ENST00000424125 869 ntBASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 GAPDHP48-201ENST00000436626 961 ntBASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 AC023141.8-201ENST00000442554 208 ntBASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 AC245517.2-201ENST00000442890 346 ntBASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 CFL1P4-201ENST00000451536 498 ntBASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 RNU1-88P-201ENST00000459274 128 ntBASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 RPS7P6-201ENST00000485777 579 ntBASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 DUTP1-201ENST00000493631 470 ntBASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 AC104685.1-201ENST00000502445 371 ntBASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 AC105384.2-201ENST00000508433 640 ntBASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 RN7SKP238-201ENST00000516483 249 ntBASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 TRIM77BP-201ENST00000524985 1119 ntBASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 AP000619.2-201ENST00000546014 969 ntBASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 AL512310.9-201ENST00000553311 948 ntBASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 AC022069.1-201ENST00000582910 658 ntBASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 AC073648.5-201ENST00000603502 305 ntBASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 QTRT1P1-201ENST00000604344 1078 ntBASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 DPRXP5-201ENST00000604662 539 ntBASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 AP003392.5-201ENST00000607857 415 ntBASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 VN1R7P-201ENST00000619242 903 ntBASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 AC019226.1-201ENST00000625666 515 ntBASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PACSIN3Q9UKS6 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PACSIN3Q9UKS6 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.47□□□□□ -1.53
PACSIN3Q9UKS6 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
PACSIN3Q9UKS6 CASC19-281ENST00000642118 1554 ntBASIC5.47□□□□□ -1.53
PACSIN3Q9UKS6 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
PACSIN3Q9UKS6 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PACSIN3Q9UKS6 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
PACSIN3Q9UKS6 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PACSIN3Q9UKS6 RNA5SP435-201ENST00000364044 108 ntBASIC5.47□□□□□ -1.53
PACSIN3Q9UKS6 RN7SKP81-201ENST00000365603 331 ntBASIC5.47□□□□□ -1.53
PACSIN3Q9UKS6 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
PACSIN3Q9UKS6 U3.23-201ENST00000391132 200 ntBASIC5.47□□□□□ -1.53
PACSIN3Q9UKS6 AC005042.1-201ENST00000393397 800 ntBASIC5.47□□□□□ -1.53
PACSIN3Q9UKS6 TAF9BP2-201ENST00000400856 499 ntBASIC5.47□□□□□ -1.53
PACSIN3Q9UKS6 ATF1P1-201ENST00000406040 927 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms