Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC003985.2-201ENST00000562268 1669 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 AL136984.1-201ENST00000607611 1893 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 RPS27AP11-201ENST00000402798 447 ntBASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 RN7SKP240-201ENST00000410583 375 ntBASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 CEACAMP8-201ENST00000413902 580 ntBASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 AC066692.1-201ENST00000421721 457 ntBASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 AC006065.1-201ENST00000422539 802 ntBASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 RPS27AP7-201ENST00000422792 455 ntBASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 AC092651.1-201ENST00000426110 312 ntBASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 MGAT2P2-201ENST00000427194 797 ntBASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 FO393419.3-201ENST00000428741 282 ntBASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 USP9YP31-201ENST00000431405 881 ntBASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 AL596276.1-201ENST00000434465 418 ntBASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 ZNF619P1-201ENST00000446539 752 ntBASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 AC016724.1-201ENST00000453215 421 ntBASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 HCG17-214ENST00000453558 732 ntTSL 5 BASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 RN7SL643P-201ENST00000471845 291 ntBASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 NCOR1P1-202ENST00000486162 291 ntBASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 HSD3BP3-201ENST00000514706 994 ntBASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 FABP5P5-201ENST00000515537 406 ntBASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 OR5AK3P-201ENST00000527486 1297 ntBASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 AL845552.1-201ENST00000556820 323 ntBASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 NPM1P42-201ENST00000560329 862 ntBASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 RBM22P12-201ENST00000567098 1255 ntBASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 AC012417.1-201ENST00000582307 1039 ntBASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 ABBA01006766.1-201ENST00000584728 294 ntBASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 AC008507.1-201ENST00000587506 734 ntBASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 OR4G1P-201ENST00000588632 938 ntBASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 AC020916.2-201ENST00000591242 360 ntBASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 AC079315.1-201ENST00000602952 623 ntBASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 AC012557.1-201ENST00000607115 611 ntBASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 AC007684.1-201ENST00000609671 477 ntBASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 AC022140.2-201ENST00000623500 188 ntBASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 AC024023.1-201ENST00000624530 922 ntBASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 MTND4P31-201ENST00000425607 1343 ntBASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 AC117409.1-201ENST00000470499 1310 ntBASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 AL121768.1-201ENST00000613917 2544 ntBASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.38□□□□□ -1.39
FOXP3Q9BZS1 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
FOXP3Q9BZS1 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.37□□□□□ -1.39
FOXP3Q9BZS1 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.37□□□□□ -1.39
FOXP3Q9BZS1 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
FOXP3Q9BZS1 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
FOXP3Q9BZS1 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.37□□□□□ -1.39
FOXP3Q9BZS1 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
FOXP3Q9BZS1 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
FOXP3Q9BZS1 AL121657.1-201ENST00000327215 531 ntBASIC6.37□□□□□ -1.39
FOXP3Q9BZS1 RNU6-707P-201ENST00000364647 95 ntBASIC6.37□□□□□ -1.39
FOXP3Q9BZS1 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
FOXP3Q9BZS1 AL512430.2-201ENST00000406786 339 ntBASIC6.37□□□□□ -1.39
FOXP3Q9BZS1 RPS3AP24-201ENST00000407896 734 ntBASIC6.37□□□□□ -1.39
FOXP3Q9BZS1 RNU2-66P-201ENST00000410650 161 ntBASIC6.37□□□□□ -1.39
FOXP3Q9BZS1 TPMTP3-201ENST00000411928 735 ntBASIC6.37□□□□□ -1.39
FOXP3Q9BZS1 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC6.37□□□□□ -1.39
FOXP3Q9BZS1 RPA2P2-201ENST00000419698 796 ntBASIC6.37□□□□□ -1.39
FOXP3Q9BZS1 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.37□□□□□ -1.39
FOXP3Q9BZS1 NANOGP4-201ENST00000427230 913 ntBASIC6.37□□□□□ -1.39
FOXP3Q9BZS1 AC108479.1-201ENST00000431142 427 ntBASIC6.37□□□□□ -1.39
FOXP3Q9BZS1 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms