Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 AL159987.1-201ENST00000347911 293 ntBASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 AL121886.1-201ENST00000358609 435 ntBASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 RNU1-150P-201ENST00000362491 162 ntBASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 RN7SKP69-201ENST00000365390 305 ntBASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 AL356320.2-201ENST00000417263 507 ntBASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 AC066692.1-201ENST00000421721 457 ntBASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 RAC1P8-201ENST00000427086 527 ntBASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 CDY14P-201ENST00000431260 1014 ntBASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 CDY12P-201ENST00000440679 1015 ntBASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 CDY13P-201ENST00000445813 1015 ntBASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 AC005002.1-201ENST00000447458 540 ntBASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 CDY23P-201ENST00000451661 1014 ntBASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 AC009120.1-201ENST00000493458 473 ntBASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 SNORA3.4-201ENST00000515969 96 ntBASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 AC124293.1-201ENST00000530034 493 ntBASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 AP002812.4-201ENST00000532139 286 ntBASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 AC079600.1-201ENST00000550326 297 ntBASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 AC069366.1-201ENST00000583159 838 ntBASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 EIF1P6-201ENST00000600054 334 ntBASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 AC021171.1-201ENST00000603137 706 ntBASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 AC005005.4-201ENST00000623789 16698 ntBASIC5.55□□□□□ -1.52
TRIM54Q9BYV2 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 AC096921.1-201ENST00000411661 375 ntBASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 RPS6P23-201ENST00000413224 722 ntBASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 AC245060.4-201ENST00000413293 1121 ntBASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 RPF2P1-201ENST00000424137 906 ntBASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 BX323845.3-201ENST00000428215 527 ntBASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 AL136231.1-201ENST00000429407 730 ntBASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 HMGB3P24-201ENST00000433260 622 ntBASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 GAPDHP48-201ENST00000436626 961 ntBASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 AL929288.2-201ENST00000446368 407 ntBASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 AP006222.1-205ENST00000450734 457 ntBASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 SEPT7P3-201ENST00000455017 621 ntBASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 AC034244.1-201ENST00000507687 207 ntBASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 IGLV3-30-201ENST00000524362 298 ntBASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 IGBP1P1-201ENST00000554337 1009 ntBASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 AC090695.1-201ENST00000561269 1222 ntBASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 MIR4311-201ENST00000580794 100 ntBASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 H3F3BP2-201ENST00000583907 357 ntBASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 AC091057.2-201ENST00000602594 792 ntBASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 MTND3P19-201ENST00000603825 345 ntBASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 Z95327.3-201ENST00000610385 572 ntBASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 AC139769.3-201ENST00000618383 175 ntBASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 VN1R7P-201ENST00000619242 903 ntBASIC5.54□□□□□ -1.52
TRIM54Q9BYV2 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms