Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
HLA-CQ95604 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
HLA-CQ95604 ARPP21-207ENST00000417925 3086 ntTSL 2 BASIC7.52□□□□□ -1.21
HLA-CQ95604 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
HLA-CQ95604 RSPO2-203ENST00000517939 2487 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
HLA-CQ95604 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
HLA-CQ95604 AC067945.1-201ENST00000342609 618 ntBASIC7.52□□□□□ -1.21
HLA-CQ95604 ZMYND8-203ENST00000352431 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
HLA-CQ95604 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
HLA-CQ95604 RNU6-289P-201ENST00000364093 107 ntBASIC7.52□□□□□ -1.21
HLA-CQ95604 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
HLA-CQ95604 CD3D-202ENST00000392884 476 ntTSL 2 BASIC7.52□□□□□ -1.21
HLA-CQ95604 AC113618.1-201ENST00000416747 285 ntBASIC7.52□□□□□ -1.21
HLA-CQ95604 AL807761.1-201ENST00000417622 171 ntBASIC7.52□□□□□ -1.21
HLA-CQ95604 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC7.52□□□□□ -1.21
HLA-CQ95604 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC7.52□□□□□ -1.21
HLA-CQ95604 AL353754.1-201ENST00000440219 340 ntBASIC7.52□□□□□ -1.21
HLA-CQ95604 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC7.52□□□□□ -1.21
HLA-CQ95604 DDX3P2-201ENST00000446138 111 ntBASIC7.52□□□□□ -1.21
HLA-CQ95604 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC7.52□□□□□ -1.21
HLA-CQ95604 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC7.52□□□□□ -1.21
HLA-CQ95604 AL135752.1-201ENST00000479477 471 ntBASIC7.52□□□□□ -1.21
HLA-CQ95604 AC108693.1-201ENST00000496068 432 ntBASIC7.52□□□□□ -1.21
HLA-CQ95604 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC7.52□□□□□ -1.21
HLA-CQ95604 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC7.52□□□□□ -1.21
HLA-CQ95604 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC7.52□□□□□ -1.21
HLA-CQ95604 SUB1P1-201ENST00000524415 382 ntBASIC7.52□□□□□ -1.21
HLA-CQ95604 OR4R1P-201ENST00000529879 463 ntBASIC7.52□□□□□ -1.21
HLA-CQ95604 OLR1-209ENST00000543993 822 ntTSL 2 BASIC7.52□□□□□ -1.21
HLA-CQ95604 ARL1-211ENST00000551828 776 ntTSL 5 BASIC7.52□□□□□ -1.21
HLA-CQ95604 AC063950.1-201ENST00000552036 308 ntBASIC7.52□□□□□ -1.21
HLA-CQ95604 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC7.52□□□□□ -1.21
HLA-CQ95604 AL163153.1-201ENST00000554223 283 ntBASIC7.52□□□□□ -1.21
HLA-CQ95604 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC7.52□□□□□ -1.21
HLA-CQ95604 AL078601.3-201ENST00000573303 535 ntBASIC7.52□□□□□ -1.21
HLA-CQ95604 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
HLA-CQ95604 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC7.52□□□□□ -1.21
HLA-CQ95604 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC7.52□□□□□ -1.21
HLA-CQ95604 OR51E1-202ENST00000530215 2942 ntBASIC7.52□□□□□ -1.21
HLA-CQ95604 CACYBP-209ENST00000613570 2835 ntTSL 2 BASIC7.52□□□□□ -1.21
HLA-CQ95604 ZNF484-203ENST00000395505 3960 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.21
HLA-CQ95604 CCDC77-203ENST00000422000 2338 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
HLA-CQ95604 LINC01829-202ENST00000433133 2100 ntTSL 2 BASIC7.52□□□□□ -1.21
HLA-CQ95604 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
HLA-CQ95604 CRB1-210ENST00000538660 3397 ntTSL 2 BASIC7.52□□□□□ -1.21
HLA-CQ95604 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC7.52□□□□□ -1.21
HLA-CQ95604 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
HLA-CQ95604 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
HLA-CQ95604 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
HLA-CQ95604 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
HLA-CQ95604 EPN2-204ENST00000395620 3860 ntAPPRIS ALT1 TSL 1 (best) BASIC7.52□□□□□ -1.21
HLA-CQ95604 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
HLA-CQ95604 AL158206.1-201ENST00000563205 1965 ntBASIC7.51□□□□□ -1.21
HLA-CQ95604 RIPOR2-205ENST00000510784 3381 ntTSL 2 BASIC7.51□□□□□ -1.21
HLA-CQ95604 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
HLA-CQ95604 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
HLA-CQ95604 LDAH-208ENST00000435420 3837 ntTSL 2 BASIC7.51□□□□□ -1.21
HLA-CQ95604 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
HLA-CQ95604 HGD-201ENST00000283871 2005 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
HLA-CQ95604 SLC15A1-202ENST00000376503 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
HLA-CQ95604 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
HLA-CQ95604 HDAC1P2-201ENST00000453661 1398 ntBASIC7.51□□□□□ -1.21
HLA-CQ95604 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC7.51□□□□□ -1.21
HLA-CQ95604 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC7.51□□□□□ -1.21
HLA-CQ95604 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
HLA-CQ95604 AL512646.1-201ENST00000269395 1077 ntBASIC7.51□□□□□ -1.21
HLA-CQ95604 Y_RNA.28-201ENST00000362554 111 ntBASIC7.51□□□□□ -1.21
HLA-CQ95604 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
HLA-CQ95604 PSMA6P1-201ENST00000400275 741 ntBASIC7.51□□□□□ -1.21
HLA-CQ95604 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC7.51□□□□□ -1.21
HLA-CQ95604 RNA5SP431-201ENST00000410312 120 ntBASIC7.51□□□□□ -1.21
HLA-CQ95604 NDUFB4P5-201ENST00000415445 361 ntBASIC7.51□□□□□ -1.21
HLA-CQ95604 CHEK2P3-201ENST00000416118 248 ntBASIC7.51□□□□□ -1.21
HLA-CQ95604 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
HLA-CQ95604 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC7.51□□□□□ -1.21
HLA-CQ95604 DUTP6-201ENST00000425573 462 ntBASIC7.51□□□□□ -1.21
HLA-CQ95604 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC7.51□□□□□ -1.21
HLA-CQ95604 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC7.51□□□□□ -1.21
HLA-CQ95604 USP24P1-201ENST00000433802 779 ntBASIC7.51□□□□□ -1.21
HLA-CQ95604 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
HLA-CQ95604 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC7.51□□□□□ -1.21
HLA-CQ95604 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC7.51□□□□□ -1.21
HLA-CQ95604 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC7.51□□□□□ -1.21
HLA-CQ95604 AC079781.2-201ENST00000446424 169 ntBASIC7.51□□□□□ -1.21
HLA-CQ95604 CECR9-201ENST00000453421 199 ntBASIC7.51□□□□□ -1.21
HLA-CQ95604 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC7.51□□□□□ -1.21
HLA-CQ95604 AC018797.1-201ENST00000510791 255 ntBASIC7.51□□□□□ -1.21
HLA-CQ95604 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC7.51□□□□□ -1.21
HLA-CQ95604 AC026801.2-201ENST00000515352 425 ntBASIC7.51□□□□□ -1.21
HLA-CQ95604 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC7.51□□□□□ -1.21
HLA-CQ95604 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC7.51□□□□□ -1.21
HLA-CQ95604 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC7.51□□□□□ -1.21
HLA-CQ95604 COX6B1P6-201ENST00000522347 255 ntBASIC7.51□□□□□ -1.21
HLA-CQ95604 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC7.51□□□□□ -1.21
HLA-CQ95604 PMS2P3-207ENST00000529061 717 ntBASIC7.51□□□□□ -1.21
HLA-CQ95604 AC006512.2-201ENST00000543250 486 ntBASIC7.51□□□□□ -1.21
HLA-CQ95604 EEF1A1P17-201ENST00000547505 1275 ntBASIC7.51□□□□□ -1.21
HLA-CQ95604 AC024257.1-201ENST00000547523 566 ntTSL 4 BASIC7.51□□□□□ -1.21
HLA-CQ95604 DUX4L52-201ENST00000549363 777 ntBASIC7.51□□□□□ -1.21
HLA-CQ95604 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms