Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.31□□□□□ -1.4
ERCC4Q92889 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ERCC4Q92889 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ERCC4Q92889 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ERCC4Q92889 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.31□□□□□ -1.4
ERCC4Q92889 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC6.31□□□□□ -1.4
ERCC4Q92889 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ERCC4Q92889 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
ERCC4Q92889 OR4F13P-202ENST00000560066 2054 ntBASIC6.31□□□□□ -1.4
ERCC4Q92889 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.31□□□□□ -1.4
ERCC4Q92889 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ERCC4Q92889 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ERCC4Q92889 RNU1-150P-201ENST00000362491 162 ntBASIC6.31□□□□□ -1.4
ERCC4Q92889 RNU6-249P-201ENST00000363016 102 ntBASIC6.31□□□□□ -1.4
ERCC4Q92889 MCTS2P-201ENST00000394552 546 ntBASIC6.31□□□□□ -1.4
ERCC4Q92889 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
ERCC4Q92889 RN7SKP240-201ENST00000410583 375 ntBASIC6.31□□□□□ -1.4
ERCC4Q92889 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.31□□□□□ -1.4
ERCC4Q92889 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.31□□□□□ -1.4
ERCC4Q92889 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC6.31□□□□□ -1.4
ERCC4Q92889 AC009784.1-201ENST00000426484 460 ntBASIC6.31□□□□□ -1.4
ERCC4Q92889 AL390023.1-201ENST00000428836 262 ntBASIC6.31□□□□□ -1.4
ERCC4Q92889 AL365396.1-201ENST00000430854 671 ntBASIC6.31□□□□□ -1.4
ERCC4Q92889 AC096638.2-201ENST00000434965 711 ntBASIC6.31□□□□□ -1.4
ERCC4Q92889 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC6.31□□□□□ -1.4
ERCC4Q92889 AC073143.1-201ENST00000436316 395 ntBASIC6.31□□□□□ -1.4
ERCC4Q92889 AC110602.1-201ENST00000437414 318 ntBASIC6.31□□□□□ -1.4
ERCC4Q92889 GSTA7P-201ENST00000438425 448 ntBASIC6.31□□□□□ -1.4
ERCC4Q92889 AL008629.1-201ENST00000438615 184 ntBASIC6.31□□□□□ -1.4
ERCC4Q92889 DNAJA1P5-201ENST00000440278 943 ntBASIC6.31□□□□□ -1.4
ERCC4Q92889 MTCYBP12-201ENST00000440559 1134 ntBASIC6.31□□□□□ -1.4
ERCC4Q92889 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC6.31□□□□□ -1.4
ERCC4Q92889 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC6.31□□□□□ -1.4
ERCC4Q92889 HSFY3P-201ENST00000444242 1191 ntBASIC6.31□□□□□ -1.4
ERCC4Q92889 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.31□□□□□ -1.4
ERCC4Q92889 EXTL2P1-201ENST00000446218 416 ntBASIC6.31□□□□□ -1.4
ERCC4Q92889 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ERCC4Q92889 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC6.31□□□□□ -1.4
ERCC4Q92889 AC239798.3-201ENST00000454459 408 ntBASIC6.31□□□□□ -1.4
ERCC4Q92889 AC244505.3-201ENST00000454598 187 ntBASIC6.31□□□□□ -1.4
ERCC4Q92889 OR2AF1P-201ENST00000454899 889 ntBASIC6.31□□□□□ -1.4
ERCC4Q92889 AC005410.1-202ENST00000460347 485 ntBASIC6.31□□□□□ -1.4
ERCC4Q92889 UBFD1P1-201ENST00000473259 814 ntBASIC6.31□□□□□ -1.4
ERCC4Q92889 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
ERCC4Q92889 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.31□□□□□ -1.4
ERCC4Q92889 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC6.31□□□□□ -1.4
ERCC4Q92889 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6.31□□□□□ -1.4
ERCC4Q92889 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.31□□□□□ -1.4
ERCC4Q92889 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.31□□□□□ -1.4
ERCC4Q92889 MRPS33P3-201ENST00000513456 322 ntBASIC6.31□□□□□ -1.4
ERCC4Q92889 Y_RNA.655-201ENST00000515919 96 ntBASIC6.31□□□□□ -1.4
ERCC4Q92889 RNU6-1129P-201ENST00000515964 104 ntBASIC6.31□□□□□ -1.4
ERCC4Q92889 RN7SKP141-201ENST00000516167 338 ntBASIC6.31□□□□□ -1.4
ERCC4Q92889 SCARNA18.1-201ENST00000516330 83 ntBASIC6.31□□□□□ -1.4
ERCC4Q92889 SNORA31.13-201ENST00000516624 135 ntBASIC6.31□□□□□ -1.4
ERCC4Q92889 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC6.31□□□□□ -1.4
ERCC4Q92889 AP003033.1-201ENST00000527244 415 ntBASIC6.31□□□□□ -1.4
ERCC4Q92889 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.31□□□□□ -1.4
ERCC4Q92889 HMGN2P36-201ENST00000529541 409 ntBASIC6.31□□□□□ -1.4
ERCC4Q92889 AP004609.2-201ENST00000532177 190 ntBASIC6.31□□□□□ -1.4
ERCC4Q92889 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ERCC4Q92889 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
ERCC4Q92889 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC6.31□□□□□ -1.4
ERCC4Q92889 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.31□□□□□ -1.4
ERCC4Q92889 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC6.31□□□□□ -1.4
ERCC4Q92889 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.31□□□□□ -1.4
ERCC4Q92889 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.31□□□□□ -1.4
ERCC4Q92889 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.31□□□□□ -1.4
ERCC4Q92889 AC009237.13-201ENST00000603193 276 ntBASIC6.31□□□□□ -1.4
ERCC4Q92889 AC005377.1-201ENST00000605126 456 ntBASIC6.31□□□□□ -1.4
ERCC4Q92889 NANOGP3-201ENST00000605855 286 ntBASIC6.31□□□□□ -1.4
ERCC4Q92889 OR2BH1P-201ENST00000608850 864 ntBASIC6.31□□□□□ -1.4
ERCC4Q92889 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC6.31□□□□□ -1.4
ERCC4Q92889 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.31□□□□□ -1.4
ERCC4Q92889 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
ERCC4Q92889 AC008079.2-201ENST00000623543 20396 ntBASIC6.31□□□□□ -1.4
ERCC4Q92889 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ERCC4Q92889 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
ERCC4Q92889 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ERCC4Q92889 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ERCC4Q92889 MAPK10-328ENST00000641553 4009 ntBASIC6.3□□□□□ -1.4
ERCC4Q92889 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
ERCC4Q92889 AL034549.2-201ENST00000618285 3373 ntBASIC6.3□□□□□ -1.4
ERCC4Q92889 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
ERCC4Q92889 AC003973.3-201ENST00000624863 2822 ntBASIC6.3□□□□□ -1.4
ERCC4Q92889 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
ERCC4Q92889 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
ERCC4Q92889 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.3□□□□□ -1.4
ERCC4Q92889 RN7SKP275-201ENST00000364626 301 ntBASIC6.3□□□□□ -1.4
ERCC4Q92889 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
ERCC4Q92889 CHMP1B2P-201ENST00000399581 597 ntBASIC6.3□□□□□ -1.4
ERCC4Q92889 SFR1P1-201ENST00000403720 688 ntBASIC6.3□□□□□ -1.4
ERCC4Q92889 AL356131.1-201ENST00000405826 414 ntBASIC6.3□□□□□ -1.4
ERCC4Q92889 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC6.3□□□□□ -1.4
ERCC4Q92889 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.3□□□□□ -1.4
ERCC4Q92889 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC6.3□□□□□ -1.4
ERCC4Q92889 RPP40P1-201ENST00000426762 456 ntBASIC6.3□□□□□ -1.4
ERCC4Q92889 NDUFA5P10-201ENST00000432147 357 ntBASIC6.3□□□□□ -1.4
ERCC4Q92889 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.3□□□□□ -1.4
ERCC4Q92889 ATP5C1P1-201ENST00000441945 895 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms