Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
CLHC1Q8NHS4 CASC19-281ENST00000642118 1554 ntBASIC4.65□□□□□ -1.66
CLHC1Q8NHS4 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CLHC1Q8NHS4 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CLHC1Q8NHS4 AC008758.3-201ENST00000507003 1829 ntBASIC4.65□□□□□ -1.66
CLHC1Q8NHS4 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
CLHC1Q8NHS4 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CLHC1Q8NHS4 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CLHC1Q8NHS4 RNA5SP428-201ENST00000365129 132 ntBASIC4.65□□□□□ -1.67
CLHC1Q8NHS4 MIR223-201ENST00000385204 110 ntBASIC4.65□□□□□ -1.67
CLHC1Q8NHS4 AL592291.1-201ENST00000403830 352 ntBASIC4.65□□□□□ -1.67
CLHC1Q8NHS4 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.65□□□□□ -1.67
CLHC1Q8NHS4 AP000534.2-201ENST00000412729 568 ntBASIC4.65□□□□□ -1.67
CLHC1Q8NHS4 IPMKP1-201ENST00000425988 855 ntBASIC4.65□□□□□ -1.67
CLHC1Q8NHS4 AC244033.1-201ENST00000426826 870 ntBASIC4.65□□□□□ -1.67
CLHC1Q8NHS4 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.65□□□□□ -1.67
CLHC1Q8NHS4 RPL12P46-201ENST00000436610 195 ntBASIC4.65□□□□□ -1.67
CLHC1Q8NHS4 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.65□□□□□ -1.67
CLHC1Q8NHS4 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC4.65□□□□□ -1.67
CLHC1Q8NHS4 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.65□□□□□ -1.67
CLHC1Q8NHS4 RPL5P30-201ENST00000465511 891 ntBASIC4.65□□□□□ -1.67
CLHC1Q8NHS4 RN7SL30P-201ENST00000488416 306 ntBASIC4.65□□□□□ -1.67
CLHC1Q8NHS4 AC020890.1-201ENST00000491837 504 ntBASIC4.65□□□□□ -1.67
CLHC1Q8NHS4 SNRPCP2-201ENST00000504370 475 ntBASIC4.65□□□□□ -1.67
CLHC1Q8NHS4 MRPS33P2-201ENST00000507850 322 ntBASIC4.65□□□□□ -1.67
CLHC1Q8NHS4 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
CLHC1Q8NHS4 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.65□□□□□ -1.67
CLHC1Q8NHS4 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.65□□□□□ -1.67
CLHC1Q8NHS4 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.65□□□□□ -1.67
CLHC1Q8NHS4 AL049839.1-201ENST00000556151 657 ntBASIC4.65□□□□□ -1.67
CLHC1Q8NHS4 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.65□□□□□ -1.67
CLHC1Q8NHS4 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.65□□□□□ -1.67
CLHC1Q8NHS4 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.65□□□□□ -1.67
CLHC1Q8NHS4 AC021106.3-201ENST00000623925 531 ntBASIC4.65□□□□□ -1.67
CLHC1Q8NHS4 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.65□□□□□ -1.67
CLHC1Q8NHS4 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.65□□□□□ -1.67
CLHC1Q8NHS4 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CLHC1Q8NHS4 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CLHC1Q8NHS4 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CLHC1Q8NHS4 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.64□□□□□ -1.67
CLHC1Q8NHS4 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLHC1Q8NHS4 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLHC1Q8NHS4 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.64□□□□□ -1.67
CLHC1Q8NHS4 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.64□□□□□ -1.67
CLHC1Q8NHS4 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLHC1Q8NHS4 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLHC1Q8NHS4 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CLHC1Q8NHS4 AC090017.1-201ENST00000548612 1779 ntBASIC4.64□□□□□ -1.67
CLHC1Q8NHS4 RNU1-106P-201ENST00000384382 164 ntBASIC4.64□□□□□ -1.67
CLHC1Q8NHS4 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.64□□□□□ -1.67
CLHC1Q8NHS4 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.64□□□□□ -1.67
CLHC1Q8NHS4 AL358176.3-201ENST00000420757 454 ntBASIC4.64□□□□□ -1.67
CLHC1Q8NHS4 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC4.64□□□□□ -1.67
CLHC1Q8NHS4 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.64□□□□□ -1.67
CLHC1Q8NHS4 CNOT7P2-201ENST00000441051 832 ntBASIC4.64□□□□□ -1.67
CLHC1Q8NHS4 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.64□□□□□ -1.67
CLHC1Q8NHS4 PPIAP20-201ENST00000449839 135 ntBASIC4.64□□□□□ -1.67
CLHC1Q8NHS4 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.64□□□□□ -1.67
CLHC1Q8NHS4 CLIC4P1-201ENST00000453177 535 ntBASIC4.64□□□□□ -1.67
CLHC1Q8NHS4 RN7SL319P-201ENST00000480656 221 ntBASIC4.64□□□□□ -1.67
CLHC1Q8NHS4 AC116562.1-201ENST00000485355 781 ntBASIC4.64□□□□□ -1.67
CLHC1Q8NHS4 RNA5SP392-201ENST00000516905 112 ntBASIC4.64□□□□□ -1.67
CLHC1Q8NHS4 RNU6-709P-201ENST00000517257 104 ntBASIC4.64□□□□□ -1.67
CLHC1Q8NHS4 AC092490.3-201ENST00000545370 572 ntBASIC4.64□□□□□ -1.67
CLHC1Q8NHS4 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.64□□□□□ -1.67
CLHC1Q8NHS4 TVP23CP2-201ENST00000571473 623 ntBASIC4.64□□□□□ -1.67
CLHC1Q8NHS4 MIR3691-201ENST00000578066 90 ntBASIC4.64□□□□□ -1.67
CLHC1Q8NHS4 FAM106CP-201ENST00000582212 507 ntBASIC4.64□□□□□ -1.67
CLHC1Q8NHS4 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC4.64□□□□□ -1.67
CLHC1Q8NHS4 MEMO1P5-201ENST00000604810 406 ntBASIC4.64□□□□□ -1.67
CLHC1Q8NHS4 TAS2R6P-201ENST00000605022 826 ntBASIC4.64□□□□□ -1.67
CLHC1Q8NHS4 AC087783.2-201ENST00000605070 562 ntBASIC4.64□□□□□ -1.67
CLHC1Q8NHS4 AP003072.5-201ENST00000623872 773 ntBASIC4.64□□□□□ -1.67
CLHC1Q8NHS4 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
CLHC1Q8NHS4 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.64□□□□□ -1.67
CLHC1Q8NHS4 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLHC1Q8NHS4 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.64□□□□□ -1.67
CLHC1Q8NHS4 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLHC1Q8NHS4 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.64□□□□□ -1.67
CLHC1Q8NHS4 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
CLHC1Q8NHS4 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 THAP12P4-201ENST00000528321 2266 ntBASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 ZNF733P-202ENST00000444809 1573 ntBASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 AC005522.1-201ENST00000395416 346 ntBASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 RN7SKP206-201ENST00000410823 293 ntBASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 GJA6P-201ENST00000415117 1042 ntBASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 AC096644.3-201ENST00000416788 338 ntBASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 AC004938.1-201ENST00000438468 308 ntBASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 VN1R96P-201ENST00000446052 858 ntBASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 AL354710.1-201ENST00000453641 246 ntBASIC4.63□□□□□ -1.67
CLHC1Q8NHS4 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms