Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.6□□□□□ -1.35
SMC1BQ8NDV3 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC6.6□□□□□ -1.35
SMC1BQ8NDV3 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC6.6□□□□□ -1.35
SMC1BQ8NDV3 AC073264.2-201ENST00000448886 166 ntBASIC6.6□□□□□ -1.35
SMC1BQ8NDV3 HMGB1P5-202ENST00000451497 985 ntBASIC6.6□□□□□ -1.35
SMC1BQ8NDV3 OR11I1P-201ENST00000486033 954 ntBASIC6.6□□□□□ -1.35
SMC1BQ8NDV3 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SMC1BQ8NDV3 AC100784.1-201ENST00000522790 310 ntBASIC6.6□□□□□ -1.35
SMC1BQ8NDV3 AC024940.3-201ENST00000538551 316 ntBASIC6.6□□□□□ -1.35
SMC1BQ8NDV3 AL049870.4-201ENST00000555741 486 ntBASIC6.6□□□□□ -1.35
SMC1BQ8NDV3 AC007494.1-201ENST00000562293 760 ntBASIC6.6□□□□□ -1.35
SMC1BQ8NDV3 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.6□□□□□ -1.35
SMC1BQ8NDV3 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
SMC1BQ8NDV3 RNU6-84P-201ENST00000607737 102 ntBASIC6.6□□□□□ -1.35
SMC1BQ8NDV3 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC6.6□□□□□ -1.35
SMC1BQ8NDV3 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.6□□□□□ -1.35
SMC1BQ8NDV3 AC093799.2-201ENST00000610062 578 ntBASIC6.6□□□□□ -1.35
SMC1BQ8NDV3 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC6.6□□□□□ -1.35
SMC1BQ8NDV3 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SMC1BQ8NDV3 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
SMC1BQ8NDV3 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SMC1BQ8NDV3 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 AC092692.1-201ENST00000623625 2595 ntBASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 MFSD8-219ENST00000641228 2559 ntBASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 AL049693.1-201ENST00000402760 611 ntBASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 AL133388.1-201ENST00000404509 287 ntBASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 NACAP7-201ENST00000407371 609 ntBASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 SNORA11C-201ENST00000408532 129 ntBASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 RNU6ATAC34P-201ENST00000408879 121 ntBASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 RSL24D1P6-201ENST00000426934 401 ntBASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 RPL5P2-201ENST00000429598 854 ntBASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 AC000041.1-201ENST00000439655 175 ntBASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 RPL6P9-201ENST00000466502 859 ntBASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 AC107398.1-201ENST00000486904 505 ntBASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 RPL23AP72-201ENST00000492447 435 ntBASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 MTCYBP35-201ENST00000503630 1137 ntBASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 AC093824.1-201ENST00000508796 343 ntBASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 SNORA31.13-201ENST00000516624 135 ntBASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 RNU6-1028P-201ENST00000517164 93 ntBASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 MAL2-205ENST00000521048 575 ntTSL 4 BASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 MTATP6P15-201ENST00000527233 835 ntBASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 AP000619.2-201ENST00000546014 969 ntBASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 AC011611.5-201ENST00000552477 578 ntBASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 OR4U1P-201ENST00000554958 912 ntBASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 MIR4789-201ENST00000577469 82 ntBASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 FAM106CP-201ENST00000582212 507 ntBASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 MYLK-221ENST00000583087 678 ntTSL 4 BASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 AC004223.2-201ENST00000590309 544 ntBASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 AC008751.2-201ENST00000597885 980 ntBASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 RPL26P30-202ENST00000602923 645 ntBASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 AL159169.2-201ENST00000610061 1269 ntBASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 MIR6780A-201ENST00000615089 68 ntBASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 AC025574.2-201ENST00000615621 514 ntBASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 AC138907.10-201ENST00000623708 983 ntBASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SMC1BQ8NDV3 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.59□□□□□ -1.36
SMC1BQ8NDV3 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
SMC1BQ8NDV3 DDX18P6-201ENST00000450119 1997 ntBASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 U6.112-201ENST00000384129 70 ntBASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 MIR1193-201ENST00000408109 78 ntBASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 HSPD1P12-201ENST00000429127 1069 ntBASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 AL035458.1-201ENST00000433096 585 ntBASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 AL603882.1-201ENST00000463059 681 ntBASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 RPS23P2-201ENST00000463671 415 ntBASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 SNRPCP3-201ENST00000474888 476 ntBASIC6.58□□□□□ -1.36
SMC1BQ8NDV3 RPL38P3-201ENST00000484463 213 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms