Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC6.36□□□□□ -1.39
SYNE4Q8N205 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE4Q8N205 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.36□□□□□ -1.39
SYNE4Q8N205 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE4Q8N205 SNORA66-201ENST00000384792 133 ntBASIC6.36□□□□□ -1.39
SYNE4Q8N205 RN7SKP27-201ENST00000410684 333 ntBASIC6.36□□□□□ -1.39
SYNE4Q8N205 AF186996.5-201ENST00000418098 904 ntBASIC6.36□□□□□ -1.39
SYNE4Q8N205 AL121882.1-201ENST00000422893 417 ntBASIC6.36□□□□□ -1.39
SYNE4Q8N205 NPM1P25-201ENST00000429734 854 ntBASIC6.36□□□□□ -1.39
SYNE4Q8N205 AC099670.2-201ENST00000435130 321 ntBASIC6.36□□□□□ -1.39
SYNE4Q8N205 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.36□□□□□ -1.39
SYNE4Q8N205 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC6.36□□□□□ -1.39
SYNE4Q8N205 REG1CP-206ENST00000447469 496 ntBASIC6.36□□□□□ -1.39
SYNE4Q8N205 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE4Q8N205 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.36□□□□□ -1.39
SYNE4Q8N205 snoU109.3-201ENST00000459477 145 ntBASIC6.36□□□□□ -1.39
SYNE4Q8N205 RPL5P12-201ENST00000477071 851 ntBASIC6.36□□□□□ -1.39
SYNE4Q8N205 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC6.36□□□□□ -1.39
SYNE4Q8N205 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC6.36□□□□□ -1.39
SYNE4Q8N205 AC021451.1-201ENST00000523498 1129 ntBASIC6.36□□□□□ -1.39
SYNE4Q8N205 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.36□□□□□ -1.39
SYNE4Q8N205 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC6.36□□□□□ -1.39
SYNE4Q8N205 OR7E10P-201ENST00000526420 991 ntBASIC6.36□□□□□ -1.39
SYNE4Q8N205 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.36□□□□□ -1.39
SYNE4Q8N205 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC6.36□□□□□ -1.39
SYNE4Q8N205 AL020997.2-201ENST00000602607 184 ntBASIC6.36□□□□□ -1.39
SYNE4Q8N205 AC084036.1-201ENST00000609190 508 ntBASIC6.36□□□□□ -1.39
SYNE4Q8N205 AC010632.3-201ENST00000611377 369 ntBASIC6.36□□□□□ -1.39
SYNE4Q8N205 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.36□□□□□ -1.39
SYNE4Q8N205 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.36□□□□□ -1.39
SYNE4Q8N205 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.36□□□□□ -1.39
SYNE4Q8N205 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.36□□□□□ -1.39
SYNE4Q8N205 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC6.36□□□□□ -1.39
SYNE4Q8N205 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE4Q8N205 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE4Q8N205 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE4Q8N205 AC016745.2-201ENST00000608834 3443 ntBASIC6.36□□□□□ -1.39
SYNE4Q8N205 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE4Q8N205 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.36□□□□□ -1.39
SYNE4Q8N205 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC6.36□□□□□ -1.39
SYNE4Q8N205 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
SYNE4Q8N205 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE4Q8N205 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE4Q8N205 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
SYNE4Q8N205 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE4Q8N205 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE4Q8N205 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
SYNE4Q8N205 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE4Q8N205 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
SYNE4Q8N205 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
SYNE4Q8N205 RPL22P22-201ENST00000395439 379 ntBASIC6.35□□□□□ -1.39
SYNE4Q8N205 MTCO2P31-201ENST00000402702 684 ntBASIC6.35□□□□□ -1.39
SYNE4Q8N205 XKRYP1-201ENST00000423438 492 ntBASIC6.35□□□□□ -1.39
SYNE4Q8N205 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.35□□□□□ -1.39
SYNE4Q8N205 XKRYP2-201ENST00000432915 492 ntBASIC6.35□□□□□ -1.39
SYNE4Q8N205 RPL5P25-201ENST00000441148 775 ntBASIC6.35□□□□□ -1.39
SYNE4Q8N205 AL137845.2-201ENST00000444292 988 ntBASIC6.35□□□□□ -1.39
SYNE4Q8N205 AL591719.1-201ENST00000444669 744 ntBASIC6.35□□□□□ -1.39
SYNE4Q8N205 AC090804.1-201ENST00000448870 490 ntBASIC6.35□□□□□ -1.39
SYNE4Q8N205 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC6.35□□□□□ -1.39
SYNE4Q8N205 AC097173.1-201ENST00000505862 819 ntBASIC6.35□□□□□ -1.39
SYNE4Q8N205 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC6.35□□□□□ -1.39
SYNE4Q8N205 AC010468.3-201ENST00000508225 458 ntBASIC6.35□□□□□ -1.39
SYNE4Q8N205 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC6.35□□□□□ -1.39
SYNE4Q8N205 RNA5SP392-201ENST00000516905 112 ntBASIC6.35□□□□□ -1.39
SYNE4Q8N205 AC092709.1-201ENST00000521355 1045 ntBASIC6.35□□□□□ -1.39
SYNE4Q8N205 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC6.35□□□□□ -1.39
SYNE4Q8N205 TOMM20P2-201ENST00000540082 421 ntBASIC6.35□□□□□ -1.39
SYNE4Q8N205 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC6.35□□□□□ -1.39
SYNE4Q8N205 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE4Q8N205 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC6.35□□□□□ -1.39
SYNE4Q8N205 AC091057.2-201ENST00000602594 792 ntBASIC6.35□□□□□ -1.39
SYNE4Q8N205 AC068880.4-201ENST00000623082 495 ntBASIC6.35□□□□□ -1.39
SYNE4Q8N205 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
SYNE4Q8N205 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
SYNE4Q8N205 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE4Q8N205 BX284613.1-201ENST00000452221 1641 ntBASIC6.35□□□□□ -1.39
SYNE4Q8N205 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.35□□□□□ -1.39
SYNE4Q8N205 AC110792.3-201ENST00000595906 1614 ntBASIC6.35□□□□□ -1.39
SYNE4Q8N205 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE4Q8N205 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.35□□□□□ -1.39
SYNE4Q8N205 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE4Q8N205 TMEM161BP1-201ENST00000457388 1457 ntBASIC6.34□□□□□ -1.39
SYNE4Q8N205 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SYNE4Q8N205 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.39
SYNE4Q8N205 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SYNE4Q8N205 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SYNE4Q8N205 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SYNE4Q8N205 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SYNE4Q8N205 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
SYNE4Q8N205 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SYNE4Q8N205 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.34□□□□□ -1.39
SYNE4Q8N205 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
SYNE4Q8N205 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SYNE4Q8N205 RNU6-609P-201ENST00000365459 107 ntBASIC6.34□□□□□ -1.39
SYNE4Q8N205 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC6.34□□□□□ -1.39
SYNE4Q8N205 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
SYNE4Q8N205 RPL10P10-201ENST00000403509 664 ntBASIC6.34□□□□□ -1.39
SYNE4Q8N205 AC096644.3-201ENST00000416788 338 ntBASIC6.34□□□□□ -1.39
SYNE4Q8N205 RPL12P28-201ENST00000430852 489 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms