Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 RNU6-709P-201ENST00000517257 104 ntBASIC4.48□□□□□ -1.69
C9orf40Q8IXQ3 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.48□□□□□ -1.69
C9orf40Q8IXQ3 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.48□□□□□ -1.69
C9orf40Q8IXQ3 EIF4A2P5-201ENST00000529914 499 ntBASIC4.48□□□□□ -1.69
C9orf40Q8IXQ3 AP001880.2-201ENST00000538233 448 ntBASIC4.48□□□□□ -1.69
C9orf40Q8IXQ3 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.48□□□□□ -1.69
C9orf40Q8IXQ3 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.48□□□□□ -1.69
C9orf40Q8IXQ3 AC027281.1-201ENST00000574178 758 ntBASIC4.48□□□□□ -1.69
C9orf40Q8IXQ3 AC022726.1-201ENST00000587475 207 ntBASIC4.48□□□□□ -1.69
C9orf40Q8IXQ3 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.48□□□□□ -1.69
C9orf40Q8IXQ3 AL121932.1-201ENST00000605542 214 ntBASIC4.48□□□□□ -1.69
C9orf40Q8IXQ3 BX322635.1-201ENST00000605804 496 ntBASIC4.48□□□□□ -1.69
C9orf40Q8IXQ3 AC104820.1-201ENST00000624183 307 ntBASIC4.48□□□□□ -1.69
C9orf40Q8IXQ3 AC073869.7-201ENST00000640874 297 ntBASIC4.48□□□□□ -1.69
C9orf40Q8IXQ3 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
C9orf40Q8IXQ3 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
C9orf40Q8IXQ3 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
C9orf40Q8IXQ3 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
C9orf40Q8IXQ3 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.48□□□□□ -1.69
C9orf40Q8IXQ3 NCLP2-201ENST00000416078 1462 ntBASIC4.48□□□□□ -1.69
C9orf40Q8IXQ3 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.48□□□□□ -1.69
C9orf40Q8IXQ3 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.48□□□□□ -1.69
C9orf40Q8IXQ3 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
C9orf40Q8IXQ3 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
C9orf40Q8IXQ3 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 SMG1P6-201ENST00000532337 2930 ntBASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 STX3-208ENST00000641815 3236 ntBASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 RN7SKP103-201ENST00000363848 320 ntBASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 MIR937-201ENST00000401271 86 ntBASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 RN7SKP100-201ENST00000411258 284 ntBASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 RBMY2KP-201ENST00000418221 992 ntBASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 LINC00993-201ENST00000420453 540 ntBASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 AL645608.4-201ENST00000423619 154 ntBASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 RPS17P8-201ENST00000434525 335 ntBASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 BTF3P6-201ENST00000448054 499 ntBASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 OR1H1P-201ENST00000448731 937 ntBASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 AC105918.1-201ENST00000474399 838 ntBASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 AC022336.1-201ENST00000475510 337 ntBASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 BUD31P1-201ENST00000521828 359 ntBASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 UBE2FP2-201ENST00000566646 462 ntBASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 RN7SL802P-201ENST00000577858 299 ntBASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 BNIP3P32-201ENST00000600015 554 ntBASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 AL512782.1-201ENST00000603093 364 ntBASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 AL391358.1-201ENST00000605342 190 ntBASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 FAM27B-201ENST00000610601 213 ntBASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 AC100827.5-201ENST00000615883 426 ntBASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 SOCS5P3-201ENST00000425115 1576 ntBASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 OR10AB1P-202ENST00000641219 1686 ntBASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 SDAD1P1-202ENST00000524156 2051 ntBASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 AC083843.3-201ENST00000623679 2186 ntBASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
C9orf40Q8IXQ3 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.69
C9orf40Q8IXQ3 TLK1P1-201ENST00000456760 2440 ntBASIC4.46□□□□□ -1.69
C9orf40Q8IXQ3 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
C9orf40Q8IXQ3 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
C9orf40Q8IXQ3 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
C9orf40Q8IXQ3 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
C9orf40Q8IXQ3 AC103591.2-201ENST00000265259 766 ntBASIC4.46□□□□□ -1.7
C9orf40Q8IXQ3 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
C9orf40Q8IXQ3 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
C9orf40Q8IXQ3 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
C9orf40Q8IXQ3 MIR7-1-201ENST00000384871 110 ntBASIC4.46□□□□□ -1.7
C9orf40Q8IXQ3 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.46□□□□□ -1.7
C9orf40Q8IXQ3 MTND3P20-201ENST00000407663 186 ntBASIC4.46□□□□□ -1.7
C9orf40Q8IXQ3 RNA5SP296-201ENST00000410523 111 ntBASIC4.46□□□□□ -1.7
C9orf40Q8IXQ3 AL139128.1-201ENST00000413921 941 ntBASIC4.46□□□□□ -1.7
C9orf40Q8IXQ3 TRIM60P17-201ENST00000415181 719 ntBASIC4.46□□□□□ -1.7
C9orf40Q8IXQ3 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.46□□□□□ -1.7
C9orf40Q8IXQ3 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.46□□□□□ -1.7
C9orf40Q8IXQ3 AL049745.1-201ENST00000433953 286 ntBASIC4.46□□□□□ -1.7
C9orf40Q8IXQ3 AC006466.1-201ENST00000438721 289 ntBASIC4.46□□□□□ -1.7
C9orf40Q8IXQ3 AL772161.1-201ENST00000439130 476 ntBASIC4.46□□□□□ -1.7
C9orf40Q8IXQ3 SNRPFP2-201ENST00000440710 251 ntBASIC4.46□□□□□ -1.7
C9orf40Q8IXQ3 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.46□□□□□ -1.7
C9orf40Q8IXQ3 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.46□□□□□ -1.7
C9orf40Q8IXQ3 AL161722.1-201ENST00000446972 1032 ntBASIC4.46□□□□□ -1.7
C9orf40Q8IXQ3 MTND3P4-201ENST00000453537 303 ntBASIC4.46□□□□□ -1.7
C9orf40Q8IXQ3 AC098799.1-201ENST00000504752 800 ntBASIC4.46□□□□□ -1.7
C9orf40Q8IXQ3 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.46□□□□□ -1.7
C9orf40Q8IXQ3 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.46□□□□□ -1.7
C9orf40Q8IXQ3 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.46□□□□□ -1.7
C9orf40Q8IXQ3 AC138938.1-201ENST00000515431 782 ntBASIC4.46□□□□□ -1.7
C9orf40Q8IXQ3 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.46□□□□□ -1.7
C9orf40Q8IXQ3 AC026616.1-201ENST00000523157 525 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms