Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AL589994.1-201ENST00000404962 340 ntBASIC5.51□□□□□ -1.53
VRK3Q8IV63 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.51□□□□□ -1.53
VRK3Q8IV63 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.51□□□□□ -1.53
VRK3Q8IV63 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.51□□□□□ -1.53
VRK3Q8IV63 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.51□□□□□ -1.53
VRK3Q8IV63 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.51□□□□□ -1.53
VRK3Q8IV63 TNPO1P1-201ENST00000423641 1138 ntBASIC5.51□□□□□ -1.53
VRK3Q8IV63 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.51□□□□□ -1.53
VRK3Q8IV63 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.51□□□□□ -1.53
VRK3Q8IV63 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.51□□□□□ -1.53
VRK3Q8IV63 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC5.51□□□□□ -1.53
VRK3Q8IV63 ELOCP8-201ENST00000439309 332 ntBASIC5.51□□□□□ -1.53
VRK3Q8IV63 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.51□□□□□ -1.53
VRK3Q8IV63 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.51□□□□□ -1.53
VRK3Q8IV63 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC5.51□□□□□ -1.53
VRK3Q8IV63 ELOCP15-201ENST00000442090 332 ntBASIC5.51□□□□□ -1.53
VRK3Q8IV63 AC064862.4-201ENST00000442180 334 ntBASIC5.51□□□□□ -1.53
VRK3Q8IV63 SRRM1P2-201ENST00000464531 1192 ntBASIC5.51□□□□□ -1.53
VRK3Q8IV63 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.51□□□□□ -1.53
VRK3Q8IV63 AC093890.1-201ENST00000502554 540 ntBASIC5.51□□□□□ -1.53
VRK3Q8IV63 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.51□□□□□ -1.53
VRK3Q8IV63 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC5.51□□□□□ -1.53
VRK3Q8IV63 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.51□□□□□ -1.53
VRK3Q8IV63 PDCL2P2-201ENST00000533651 189 ntBASIC5.51□□□□□ -1.53
VRK3Q8IV63 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.51□□□□□ -1.53
VRK3Q8IV63 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VRK3Q8IV63 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.51□□□□□ -1.53
VRK3Q8IV63 AC005771.1-201ENST00000585581 349 ntBASIC5.51□□□□□ -1.53
VRK3Q8IV63 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.51□□□□□ -1.53
VRK3Q8IV63 AC008759.1-201ENST00000589783 983 ntBASIC5.51□□□□□ -1.53
VRK3Q8IV63 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.51□□□□□ -1.53
VRK3Q8IV63 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC5.51□□□□□ -1.53
VRK3Q8IV63 RN7SKP299-201ENST00000606679 301 ntBASIC5.51□□□□□ -1.53
VRK3Q8IV63 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC5.51□□□□□ -1.53
VRK3Q8IV63 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.51□□□□□ -1.53
VRK3Q8IV63 AC092656.1-203ENST00000624134 423 ntBASIC5.51□□□□□ -1.53
VRK3Q8IV63 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.51□□□□□ -1.53
VRK3Q8IV63 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VRK3Q8IV63 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VRK3Q8IV63 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VRK3Q8IV63 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
VRK3Q8IV63 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.51□□□□□ -1.53
VRK3Q8IV63 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
VRK3Q8IV63 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VRK3Q8IV63 AC018809.2-201ENST00000602436 3823 ntBASIC5.51□□□□□ -1.53
VRK3Q8IV63 HSPD1P11-201ENST00000508643 1702 ntBASIC5.51□□□□□ -1.53
VRK3Q8IV63 MSL3P1-202ENST00000440028 1468 ntBASIC5.51□□□□□ -1.53
VRK3Q8IV63 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VRK3Q8IV63 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
VRK3Q8IV63 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VRK3Q8IV63 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VRK3Q8IV63 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VRK3Q8IV63 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.5□□□□□ -1.53
VRK3Q8IV63 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
VRK3Q8IV63 HSPD1P7-201ENST00000447985 1686 ntBASIC5.5□□□□□ -1.53
VRK3Q8IV63 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VRK3Q8IV63 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
VRK3Q8IV63 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
VRK3Q8IV63 TMSB4XP4-201ENST00000323496 618 ntBASIC5.5□□□□□ -1.53
VRK3Q8IV63 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
VRK3Q8IV63 FAM133CP-201ENST00000332869 704 ntBASIC5.5□□□□□ -1.53
VRK3Q8IV63 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
VRK3Q8IV63 AL121886.1-201ENST00000358609 435 ntBASIC5.5□□□□□ -1.53
VRK3Q8IV63 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VRK3Q8IV63 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.5□□□□□ -1.53
VRK3Q8IV63 RSL24D1P4-201ENST00000400938 484 ntBASIC5.5□□□□□ -1.53
VRK3Q8IV63 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC5.5□□□□□ -1.53
VRK3Q8IV63 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.5□□□□□ -1.53
VRK3Q8IV63 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.5□□□□□ -1.53
VRK3Q8IV63 EIF4A1P1-201ENST00000420241 934 ntBASIC5.5□□□□□ -1.53
VRK3Q8IV63 AL133325.1-201ENST00000421090 382 ntBASIC5.5□□□□□ -1.53
VRK3Q8IV63 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.5□□□□□ -1.53
VRK3Q8IV63 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC5.5□□□□□ -1.53
VRK3Q8IV63 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.5□□□□□ -1.53
VRK3Q8IV63 AC007563.3-201ENST00000433233 371 ntBASIC5.5□□□□□ -1.53
VRK3Q8IV63 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.5□□□□□ -1.53
VRK3Q8IV63 HMGN1P36-201ENST00000446623 298 ntBASIC5.5□□□□□ -1.53
VRK3Q8IV63 RN7SL72P-201ENST00000460697 269 ntBASIC5.5□□□□□ -1.53
VRK3Q8IV63 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
VRK3Q8IV63 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.5□□□□□ -1.53
VRK3Q8IV63 AC022336.1-201ENST00000475510 337 ntBASIC5.5□□□□□ -1.53
VRK3Q8IV63 RPS17P5-201ENST00000498293 408 ntBASIC5.5□□□□□ -1.53
VRK3Q8IV63 AC112184.1-201ENST00000505179 312 ntBASIC5.5□□□□□ -1.53
VRK3Q8IV63 AC138866.2-201ENST00000508650 584 ntBASIC5.5□□□□□ -1.53
VRK3Q8IV63 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.5□□□□□ -1.53
VRK3Q8IV63 RNU6-1178P-201ENST00000516674 107 ntBASIC5.5□□□□□ -1.53
VRK3Q8IV63 RNU6-232P-201ENST00000517144 64 ntBASIC5.5□□□□□ -1.53
VRK3Q8IV63 TMEM97P2-201ENST00000517841 403 ntBASIC5.5□□□□□ -1.53
VRK3Q8IV63 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC5.5□□□□□ -1.53
VRK3Q8IV63 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.5□□□□□ -1.53
VRK3Q8IV63 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VRK3Q8IV63 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.5□□□□□ -1.53
VRK3Q8IV63 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC5.5□□□□□ -1.53
VRK3Q8IV63 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.5□□□□□ -1.53
VRK3Q8IV63 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.5□□□□□ -1.53
VRK3Q8IV63 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC5.5□□□□□ -1.53
VRK3Q8IV63 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.5□□□□□ -1.53
VRK3Q8IV63 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.5□□□□□ -1.53
VRK3Q8IV63 ACTR3BP3-201ENST00000565577 979 ntBASIC5.5□□□□□ -1.53
VRK3Q8IV63 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms