Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 AC091057.2-201ENST00000602594 792 ntBASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 NTAN1P1-201ENST00000603150 646 ntBASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 AC092954.1-201ENST00000609121 445 ntBASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 AC024257.5-201ENST00000612739 531 ntBASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 RN7SL544P-201ENST00000617232 284 ntBASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 RN7SL763P-201ENST00000620922 284 ntBASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 CASC19-206ENST00000641028 1430 ntBASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 AC010329.2-201ENST00000595195 2737 ntBASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 MTND4P13-201ENST00000402078 1023 ntBASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 ERHP2-201ENST00000402323 299 ntBASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 GSTM3P2-201ENST00000412746 530 ntBASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 BMS1P17-202ENST00000416720 316 ntBASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 REREP1Y-201ENST00000422655 198 ntBASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 AL009174.1-201ENST00000426577 416 ntBASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 REREP2Y-201ENST00000439103 200 ntBASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 UBE2V1P5-201ENST00000440070 405 ntBASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 YWHAQP9-201ENST00000445891 512 ntBASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 AC233982.1-201ENST00000451247 436 ntBASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 AC005229.2-201ENST00000456995 399 ntBASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 GAPDHP39-201ENST00000481866 979 ntBASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 MTND2P14-201ENST00000482139 351 ntBASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 DUTP7-201ENST00000507982 486 ntBASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 RNU6-416P-201ENST00000516265 103 ntBASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 AC008562.1-201ENST00000521763 330 ntBASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 AP001636.2-201ENST00000525517 696 ntBASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 SETP1-201ENST00000556014 845 ntBASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 AC068714.1-201ENST00000559623 800 ntBASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 AC119403.2-201ENST00000590960 598 ntBASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 VN1R78P-201ENST00000597393 564 ntBASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 AC048344.4-201ENST00000619744 527 ntBASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
CCDC144BQ3MJ40 AC025263.3-201ENST00000622965 1396 ntBASIC6.69□□□□□ -1.34
CCDC144BQ3MJ40 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
CCDC144BQ3MJ40 AC022031.1-201ENST00000585985 2593 ntBASIC6.69□□□□□ -1.34
CCDC144BQ3MJ40 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CCDC144BQ3MJ40 AC016583.1-201ENST00000624221 2431 ntBASIC6.69□□□□□ -1.34
CCDC144BQ3MJ40 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CCDC144BQ3MJ40 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.69□□□□□ -1.34
CCDC144BQ3MJ40 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.69□□□□□ -1.34
CCDC144BQ3MJ40 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.69□□□□□ -1.34
CCDC144BQ3MJ40 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
CCDC144BQ3MJ40 RNA5SP453-201ENST00000362503 119 ntBASIC6.69□□□□□ -1.34
CCDC144BQ3MJ40 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC6.69□□□□□ -1.34
CCDC144BQ3MJ40 MIR16-1-201ENST00000385271 89 ntBASIC6.69□□□□□ -1.34
CCDC144BQ3MJ40 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.69□□□□□ -1.34
CCDC144BQ3MJ40 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CCDC144BQ3MJ40 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC6.69□□□□□ -1.34
CCDC144BQ3MJ40 EEF1B2P6-201ENST00000445713 673 ntBASIC6.69□□□□□ -1.34
CCDC144BQ3MJ40 REG1CP-206ENST00000447469 496 ntBASIC6.69□□□□□ -1.34
CCDC144BQ3MJ40 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.69□□□□□ -1.34
CCDC144BQ3MJ40 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC6.69□□□□□ -1.34
CCDC144BQ3MJ40 AC093166.4-201ENST00000457867 318 ntBASIC6.69□□□□□ -1.34
CCDC144BQ3MJ40 RNU6-1218P-201ENST00000458990 108 ntBASIC6.69□□□□□ -1.34
CCDC144BQ3MJ40 AC104164.1-201ENST00000460282 590 ntBASIC6.69□□□□□ -1.34
CCDC144BQ3MJ40 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.69□□□□□ -1.34
CCDC144BQ3MJ40 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.69□□□□□ -1.34
CCDC144BQ3MJ40 RPS27AP18-201ENST00000515536 459 ntBASIC6.69□□□□□ -1.34
CCDC144BQ3MJ40 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC6.69□□□□□ -1.34
CCDC144BQ3MJ40 AC138832.1-201ENST00000522871 556 ntBASIC6.69□□□□□ -1.34
CCDC144BQ3MJ40 IGLV3-30-201ENST00000524362 298 ntBASIC6.69□□□□□ -1.34
CCDC144BQ3MJ40 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC6.69□□□□□ -1.34
CCDC144BQ3MJ40 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.69□□□□□ -1.34
CCDC144BQ3MJ40 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.69□□□□□ -1.34
CCDC144BQ3MJ40 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.69□□□□□ -1.34
CCDC144BQ3MJ40 MIR3912-201ENST00000577566 105 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms