Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 Y_RNA.719-201ENST00000517156 106 ntBASIC3.73□□□□□ -1.81
HIST1H1AQ02539 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 IGKV2-18-201ENST00000522607 343 ntBASIC3.73□□□□□ -1.81
HIST1H1AQ02539 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 NMNAT1P1-201ENST00000554095 876 ntBASIC3.73□□□□□ -1.81
HIST1H1AQ02539 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 AC011445.2-201ENST00000599274 173 ntBASIC3.73□□□□□ -1.81
HIST1H1AQ02539 AC091979.2-201ENST00000607514 214 ntBASIC3.73□□□□□ -1.81
HIST1H1AQ02539 AC023813.4-201ENST00000607580 580 ntBASIC3.73□□□□□ -1.81
HIST1H1AQ02539 AC015813.4-201ENST00000610469 179 ntBASIC3.73□□□□□ -1.81
HIST1H1AQ02539 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 PANDAR-201ENST00000629595 1506 ntBASIC3.73□□□□□ -1.81
HIST1H1AQ02539 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 Z98755.1-201ENST00000407015 1384 ntBASIC3.73□□□□□ -1.81
HIST1H1AQ02539 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HIST1H1AQ02539 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HIST1H1AQ02539 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC3.72□□□□□ -1.81
HIST1H1AQ02539 AL672167.1-205ENST00000641112 3080 ntBASIC3.72□□□□□ -1.81
HIST1H1AQ02539 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.72□□□□□ -1.81
HIST1H1AQ02539 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC3.72□□□□□ -1.81
HIST1H1AQ02539 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
HIST1H1AQ02539 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HIST1H1AQ02539 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
HIST1H1AQ02539 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
HIST1H1AQ02539 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
HIST1H1AQ02539 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
HIST1H1AQ02539 RNA5SP435-201ENST00000364044 108 ntBASIC3.72□□□□□ -1.81
HIST1H1AQ02539 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
HIST1H1AQ02539 NCSTNP1-201ENST00000406229 144 ntBASIC3.72□□□□□ -1.81
HIST1H1AQ02539 GLS-204ENST00000409428 816 ntTSL 2 BASIC3.72□□□□□ -1.81
HIST1H1AQ02539 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC3.72□□□□□ -1.81
HIST1H1AQ02539 IGKV1OR9-1-201ENST00000424370 284 ntBASIC3.72□□□□□ -1.81
HIST1H1AQ02539 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC3.72□□□□□ -1.81
HIST1H1AQ02539 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC3.72□□□□□ -1.81
HIST1H1AQ02539 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC3.72□□□□□ -1.81
HIST1H1AQ02539 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HIST1H1AQ02539 AL450023.3-201ENST00000440592 271 ntBASIC3.72□□□□□ -1.81
HIST1H1AQ02539 TCEA1P1-201ENST00000449716 880 ntBASIC3.72□□□□□ -1.81
HIST1H1AQ02539 RHEBP2-201ENST00000450289 600 ntBASIC3.72□□□□□ -1.81
HIST1H1AQ02539 IGHV5-78-201ENST00000450948 295 ntBASIC3.72□□□□□ -1.81
HIST1H1AQ02539 AURKAPS1-201ENST00000451805 1212 ntBASIC3.72□□□□□ -1.81
HIST1H1AQ02539 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC3.72□□□□□ -1.81
HIST1H1AQ02539 AC024558.1-201ENST00000505008 528 ntBASIC3.72□□□□□ -1.81
HIST1H1AQ02539 IGHVII-44-2-201ENST00000517728 250 ntBASIC3.72□□□□□ -1.81
HIST1H1AQ02539 IGKV3D-34-201ENST00000522638 302 ntBASIC3.72□□□□□ -1.81
HIST1H1AQ02539 AC090281.1-201ENST00000523019 276 ntBASIC3.72□□□□□ -1.81
HIST1H1AQ02539 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC3.72□□□□□ -1.81
HIST1H1AQ02539 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC3.72□□□□□ -1.81
HIST1H1AQ02539 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC3.72□□□□□ -1.81
HIST1H1AQ02539 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC3.72□□□□□ -1.81
HIST1H1AQ02539 AC012146.2-201ENST00000576545 416 ntBASIC3.72□□□□□ -1.81
HIST1H1AQ02539 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC3.72□□□□□ -1.81
HIST1H1AQ02539 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.72□□□□□ -1.81
HIST1H1AQ02539 AC105254.2-201ENST00000603636 436 ntBASIC3.72□□□□□ -1.81
HIST1H1AQ02539 IMMP1LP1-201ENST00000605170 488 ntBASIC3.72□□□□□ -1.81
HIST1H1AQ02539 AP000864.1-201ENST00000609424 650 ntBASIC3.72□□□□□ -1.81
HIST1H1AQ02539 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.72□□□□□ -1.81
HIST1H1AQ02539 AL121873.1-201ENST00000616013 524 ntBASIC3.72□□□□□ -1.81
HIST1H1AQ02539 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.72□□□□□ -1.81
HIST1H1AQ02539 AC140113.4-201ENST00000622087 222 ntBASIC3.72□□□□□ -1.81
HIST1H1AQ02539 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC3.72□□□□□ -1.81
HIST1H1AQ02539 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC3.72□□□□□ -1.81
HIST1H1AQ02539 EEF1A1P36-201ENST00000427807 1351 ntBASIC3.72□□□□□ -1.81
HIST1H1AQ02539 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC3.72□□□□□ -1.81
HIST1H1AQ02539 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HIST1H1AQ02539 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HIST1H1AQ02539 IRF5P1-201ENST00000504852 2164 ntBASIC3.72□□□□□ -1.81
HIST1H1AQ02539 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HIST1H1AQ02539 ZNF733P-202ENST00000444809 1573 ntBASIC3.72□□□□□ -1.81
HIST1H1AQ02539 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC3.72□□□□□ -1.81
HIST1H1AQ02539 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.72□□□□□ -1.81
HIST1H1AQ02539 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
HIST1H1AQ02539 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC3.71□□□□□ -1.82
HIST1H1AQ02539 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HIST1H1AQ02539 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HIST1H1AQ02539 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.71□□□□□ -1.82
HIST1H1AQ02539 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HIST1H1AQ02539 SNORD96B-201ENST00000386148 79 ntBASIC3.71□□□□□ -1.82
HIST1H1AQ02539 AL512422.1-201ENST00000407033 553 ntBASIC3.71□□□□□ -1.82
HIST1H1AQ02539 MIR1286-201ENST00000408112 78 ntBASIC3.71□□□□□ -1.82
HIST1H1AQ02539 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC3.71□□□□□ -1.82
HIST1H1AQ02539 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC3.71□□□□□ -1.82
HIST1H1AQ02539 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC3.71□□□□□ -1.82
HIST1H1AQ02539 DDX39BP1-205ENST00000422507 192 ntBASIC3.71□□□□□ -1.82
HIST1H1AQ02539 EIF4HP2-201ENST00000424380 563 ntBASIC3.71□□□□□ -1.82
HIST1H1AQ02539 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms