Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AC025262.3-201ENST00000623666 360 ntBASIC3.62□□□□□ -1.83
CCL20P78556 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC3.62□□□□□ -1.83
CCL20P78556 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCL20P78556 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCL20P78556 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCL20P78556 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
CCL20P78556 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.62□□□□□ -1.83
CCL20P78556 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCL20P78556 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.62□□□□□ -1.83
CCL20P78556 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CCL20P78556 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CCL20P78556 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCL20P78556 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCL20P78556 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCL20P78556 KARSP3-201ENST00000571212 1504 ntBASIC3.61□□□□□ -1.83
CCL20P78556 AC091305.2-201ENST00000624049 1576 ntBASIC3.61□□□□□ -1.83
CCL20P78556 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCL20P78556 RN7SKP257-201ENST00000364525 309 ntBASIC3.61□□□□□ -1.83
CCL20P78556 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCL20P78556 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CCL20P78556 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCL20P78556 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CCL20P78556 RN7SKP59-201ENST00000410520 314 ntBASIC3.61□□□□□ -1.83
CCL20P78556 MTND4LP21-201ENST00000415303 295 ntBASIC3.61□□□□□ -1.83
CCL20P78556 MTND2P11-201ENST00000423638 648 ntBASIC3.61□□□□□ -1.83
CCL20P78556 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC3.61□□□□□ -1.83
CCL20P78556 CDY14P-201ENST00000431260 1014 ntBASIC3.61□□□□□ -1.83
CCL20P78556 YWHAEP5-201ENST00000431545 765 ntBASIC3.61□□□□□ -1.83
CCL20P78556 CDY12P-201ENST00000440679 1015 ntBASIC3.61□□□□□ -1.83
CCL20P78556 CDY13P-201ENST00000445813 1015 ntBASIC3.61□□□□□ -1.83
CCL20P78556 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.61□□□□□ -1.83
CCL20P78556 CDY23P-201ENST00000451661 1014 ntBASIC3.61□□□□□ -1.83
CCL20P78556 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC3.61□□□□□ -1.83
CCL20P78556 CCDC75P1-201ENST00000469247 791 ntBASIC3.61□□□□□ -1.83
CCL20P78556 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC3.61□□□□□ -1.83
CCL20P78556 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC3.61□□□□□ -1.83
CCL20P78556 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC3.61□□□□□ -1.83
CCL20P78556 RN7SKP260-201ENST00000516907 149 ntBASIC3.61□□□□□ -1.83
CCL20P78556 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC3.61□□□□□ -1.83
CCL20P78556 OR4A46P-201ENST00000527255 933 ntBASIC3.61□□□□□ -1.83
CCL20P78556 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC3.61□□□□□ -1.83
CCL20P78556 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC3.61□□□□□ -1.83
CCL20P78556 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC3.61□□□□□ -1.83
CCL20P78556 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC3.61□□□□□ -1.83
CCL20P78556 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC3.61□□□□□ -1.83
CCL20P78556 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CCL20P78556 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCL20P78556 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC3.61□□□□□ -1.83
CCL20P78556 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC3.61□□□□□ -1.83
CCL20P78556 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.61□□□□□ -1.83
CCL20P78556 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC3.61□□□□□ -1.83
CCL20P78556 AC012603.1-201ENST00000606424 528 ntBASIC3.61□□□□□ -1.83
CCL20P78556 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC3.61□□□□□ -1.83
CCL20P78556 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC3.61□□□□□ -1.83
CCL20P78556 AC233309.1-201ENST00000619522 751 ntBASIC3.61□□□□□ -1.83
CCL20P78556 MIR4727-201ENST00000622232 55 ntBASIC3.61□□□□□ -1.83
CCL20P78556 AL353662.3-201ENST00000625131 237 ntBASIC3.61□□□□□ -1.83
CCL20P78556 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC3.61□□□□□ -1.83
CCL20P78556 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCL20P78556 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.61□□□□□ -1.83
CCL20P78556 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCL20P78556 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC3.61□□□□□ -1.83
CCL20P78556 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
CCL20P78556 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
CCL20P78556 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CCL20P78556 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCL20P78556 AC018555.1-201ENST00000567548 1980 ntBASIC3.6□□□□□ -1.83
CCL20P78556 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCL20P78556 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.6□□□□□ -1.83
CCL20P78556 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCL20P78556 OR10J6P-201ENST00000289731 930 ntBASIC3.6□□□□□ -1.83
CCL20P78556 RN7SKP160-201ENST00000363804 340 ntBASIC3.6□□□□□ -1.83
CCL20P78556 RNA5SP428-201ENST00000365129 132 ntBASIC3.6□□□□□ -1.83
CCL20P78556 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC3.6□□□□□ -1.83
CCL20P78556 AL078604.1-201ENST00000404609 466 ntBASIC3.6□□□□□ -1.83
CCL20P78556 RNA5SP306-201ENST00000411087 107 ntBASIC3.6□□□□□ -1.83
CCL20P78556 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC3.6□□□□□ -1.83
CCL20P78556 UBTFL3-201ENST00000418934 1024 ntBASIC3.6□□□□□ -1.83
CCL20P78556 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.6□□□□□ -1.83
CCL20P78556 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCL20P78556 GLUD1P9-201ENST00000420997 1173 ntBASIC3.6□□□□□ -1.83
CCL20P78556 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.6□□□□□ -1.83
CCL20P78556 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC3.6□□□□□ -1.83
CCL20P78556 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.6□□□□□ -1.83
CCL20P78556 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC3.6□□□□□ -1.83
CCL20P78556 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC3.6□□□□□ -1.83
CCL20P78556 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC3.6□□□□□ -1.83
CCL20P78556 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCL20P78556 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCL20P78556 UBTFL6-201ENST00000477929 1024 ntBASIC3.6□□□□□ -1.83
CCL20P78556 AC044810.1-201ENST00000480271 711 ntBASIC3.6□□□□□ -1.83
CCL20P78556 TRBV8-1-201ENST00000481590 279 ntBASIC3.6□□□□□ -1.83
CCL20P78556 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC3.6□□□□□ -1.83
CCL20P78556 MRPS5P3-201ENST00000515577 166 ntBASIC3.6□□□□□ -1.83
CCL20P78556 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC3.6□□□□□ -1.83
CCL20P78556 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC3.6□□□□□ -1.83
CCL20P78556 AC134669.1-201ENST00000581275 672 ntBASIC3.6□□□□□ -1.83
CCL20P78556 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC3.6□□□□□ -1.83
CCL20P78556 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.6□□□□□ -1.83
CCL20P78556 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms