Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.03□□□□□ -1.76
SPCS3P61009 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SPCS3P61009 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SPCS3P61009 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.03□□□□□ -1.76
SPCS3P61009 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.03□□□□□ -1.76
SPCS3P61009 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SPCS3P61009 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SPCS3P61009 SNORA62.2-201ENST00000364672 152 ntBASIC4.03□□□□□ -1.76
SPCS3P61009 RNA5SP510-201ENST00000364697 99 ntBASIC4.03□□□□□ -1.76
SPCS3P61009 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC4.03□□□□□ -1.76
SPCS3P61009 LRRC37BP1-201ENST00000398851 714 ntBASIC4.03□□□□□ -1.76
SPCS3P61009 AP000580.1-201ENST00000404439 358 ntBASIC4.03□□□□□ -1.76
SPCS3P61009 MIR1183-201ENST00000408856 89 ntBASIC4.03□□□□□ -1.76
SPCS3P61009 AC019050.1-201ENST00000418508 492 ntBASIC4.03□□□□□ -1.76
SPCS3P61009 QRSL1P2-201ENST00000418582 964 ntBASIC4.03□□□□□ -1.76
SPCS3P61009 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SPCS3P61009 AC093698.1-201ENST00000423843 571 ntBASIC4.03□□□□□ -1.76
SPCS3P61009 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC4.03□□□□□ -1.76
SPCS3P61009 NMNAT1P2-201ENST00000435192 860 ntBASIC4.03□□□□□ -1.76
SPCS3P61009 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.03□□□□□ -1.76
SPCS3P61009 PSMD10P3-201ENST00000437000 448 ntBASIC4.03□□□□□ -1.76
SPCS3P61009 CYCSP12-201ENST00000437729 300 ntBASIC4.03□□□□□ -1.76
SPCS3P61009 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.03□□□□□ -1.76
SPCS3P61009 HMGN1P2-201ENST00000445197 310 ntBASIC4.03□□□□□ -1.76
SPCS3P61009 SUMO2P1-206ENST00000445436 284 ntBASIC4.03□□□□□ -1.76
SPCS3P61009 HMGN1P36-201ENST00000446623 298 ntBASIC4.03□□□□□ -1.76
SPCS3P61009 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SPCS3P61009 AL691482.1-201ENST00000453255 87 ntBASIC4.03□□□□□ -1.76
SPCS3P61009 YWHAEP1-201ENST00000453697 763 ntBASIC4.03□□□□□ -1.76
SPCS3P61009 HMGB1P4-201ENST00000455362 567 ntBASIC4.03□□□□□ -1.76
SPCS3P61009 RN7SL517P-201ENST00000462240 305 ntBASIC4.03□□□□□ -1.76
SPCS3P61009 AC084754.1-201ENST00000463466 464 ntBASIC4.03□□□□□ -1.76
SPCS3P61009 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.03□□□□□ -1.76
SPCS3P61009 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.03□□□□□ -1.76
SPCS3P61009 AC025445.1-201ENST00000502728 300 ntBASIC4.03□□□□□ -1.76
SPCS3P61009 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC4.03□□□□□ -1.76
SPCS3P61009 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.03□□□□□ -1.76
SPCS3P61009 AC022826.1-201ENST00000519383 805 ntBASIC4.03□□□□□ -1.76
SPCS3P61009 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC4.03□□□□□ -1.76
SPCS3P61009 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
SPCS3P61009 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.03□□□□□ -1.76
SPCS3P61009 AC027544.3-201ENST00000535082 757 ntBASIC4.03□□□□□ -1.76
SPCS3P61009 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.03□□□□□ -1.76
SPCS3P61009 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC4.03□□□□□ -1.76
SPCS3P61009 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.03□□□□□ -1.76
SPCS3P61009 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.03□□□□□ -1.76
SPCS3P61009 OR1AB1P-201ENST00000585564 761 ntBASIC4.03□□□□□ -1.76
SPCS3P61009 VN1R79P-201ENST00000593540 513 ntBASIC4.03□□□□□ -1.76
SPCS3P61009 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.03□□□□□ -1.76
SPCS3P61009 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC4.03□□□□□ -1.76
SPCS3P61009 AC069307.1-201ENST00000602820 447 ntBASIC4.03□□□□□ -1.76
SPCS3P61009 AC087783.2-201ENST00000605070 562 ntBASIC4.03□□□□□ -1.76
SPCS3P61009 AP002505.2-201ENST00000623585 696 ntBASIC4.03□□□□□ -1.76
SPCS3P61009 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SPCS3P61009 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SPCS3P61009 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SPCS3P61009 MARK2P15-201ENST00000432204 2186 ntBASIC4.03□□□□□ -1.76
SPCS3P61009 IRF5P1-201ENST00000504852 2164 ntBASIC4.03□□□□□ -1.76
SPCS3P61009 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SPCS3P61009 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SPCS3P61009 AL359922.3-201ENST00000624779 1670 ntBASIC4.03□□□□□ -1.76
SPCS3P61009 CASC19-206ENST00000641028 1430 ntBASIC4.03□□□□□ -1.76
SPCS3P61009 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SPCS3P61009 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
SPCS3P61009 AC010329.2-201ENST00000595195 2737 ntBASIC4.02□□□□□ -1.77
SPCS3P61009 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.02□□□□□ -1.77
SPCS3P61009 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
SPCS3P61009 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SPCS3P61009 DHX9P1-201ENST00000436565 3076 ntBASIC4.02□□□□□ -1.77
SPCS3P61009 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SPCS3P61009 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SPCS3P61009 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SPCS3P61009 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SPCS3P61009 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SPCS3P61009 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
SPCS3P61009 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.02□□□□□ -1.77
SPCS3P61009 CKS1BP6-201ENST00000424932 240 ntBASIC4.02□□□□□ -1.77
SPCS3P61009 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC4.02□□□□□ -1.77
SPCS3P61009 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.02□□□□□ -1.77
SPCS3P61009 AC092162.1-201ENST00000432828 434 ntBASIC4.02□□□□□ -1.77
SPCS3P61009 RPS29P9-201ENST00000440360 171 ntBASIC4.02□□□□□ -1.77
SPCS3P61009 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.02□□□□□ -1.77
SPCS3P61009 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.02□□□□□ -1.77
SPCS3P61009 AL451050.1-201ENST00000450126 415 ntBASIC4.02□□□□□ -1.77
SPCS3P61009 HIGD1AP8-201ENST00000453927 274 ntBASIC4.02□□□□□ -1.77
SPCS3P61009 RN7SL799P-201ENST00000475891 298 ntBASIC4.02□□□□□ -1.77
SPCS3P61009 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.02□□□□□ -1.77
SPCS3P61009 PFN1P8-201ENST00000497012 543 ntBASIC4.02□□□□□ -1.77
SPCS3P61009 AK6-203ENST00000502819 743 ntTSL 5 BASIC4.02□□□□□ -1.77
SPCS3P61009 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.02□□□□□ -1.77
SPCS3P61009 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SPCS3P61009 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.02□□□□□ -1.77
SPCS3P61009 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.02□□□□□ -1.77
SPCS3P61009 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.02□□□□□ -1.77
SPCS3P61009 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.02□□□□□ -1.77
SPCS3P61009 AC134349.2-201ENST00000535136 910 ntBASIC4.02□□□□□ -1.77
SPCS3P61009 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SPCS3P61009 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.02□□□□□ -1.77
SPCS3P61009 AC126177.5-201ENST00000549599 178 ntBASIC4.02□□□□□ -1.77
SPCS3P61009 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms