Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.95□□□□□ -1.62
CDH12P55289 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.95□□□□□ -1.62
CDH12P55289 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.95□□□□□ -1.62
CDH12P55289 AL049870.4-201ENST00000555741 486 ntBASIC4.95□□□□□ -1.62
CDH12P55289 AL049872.1-201ENST00000556323 322 ntBASIC4.95□□□□□ -1.62
CDH12P55289 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.95□□□□□ -1.62
CDH12P55289 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.95□□□□□ -1.62
CDH12P55289 NDUFA5P11-201ENST00000567995 343 ntBASIC4.95□□□□□ -1.62
CDH12P55289 AC027455.1-201ENST00000574104 594 ntBASIC4.95□□□□□ -1.62
CDH12P55289 SNORD39.2-201ENST00000579995 76 ntBASIC4.95□□□□□ -1.62
CDH12P55289 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.95□□□□□ -1.62
CDH12P55289 AC027243.2-201ENST00000602530 724 ntBASIC4.95□□□□□ -1.62
CDH12P55289 AC022022.2-201ENST00000602989 360 ntBASIC4.95□□□□□ -1.62
CDH12P55289 AC100767.2-201ENST00000604840 693 ntBASIC4.95□□□□□ -1.62
CDH12P55289 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.95□□□□□ -1.62
CDH12P55289 Z95327.3-201ENST00000610385 572 ntBASIC4.95□□□□□ -1.62
CDH12P55289 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.95□□□□□ -1.62
CDH12P55289 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CDH12P55289 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH12P55289 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH12P55289 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.95□□□□□ -1.62
CDH12P55289 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CDH12P55289 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH12P55289 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH12P55289 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.95□□□□□ -1.62
CDH12P55289 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH12P55289 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH12P55289 AC093849.1-201ENST00000563631 2209 ntBASIC4.95□□□□□ -1.62
CDH12P55289 AC114947.2-201ENST00000565748 2125 ntBASIC4.94□□□□□ -1.62
CDH12P55289 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDH12P55289 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CDH12P55289 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CDH12P55289 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDH12P55289 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
CDH12P55289 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDH12P55289 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CDH12P55289 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.94□□□□□ -1.62
CDH12P55289 RNU4-2-201ENST00000365668 141 ntBASIC4.94□□□□□ -1.62
CDH12P55289 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CDH12P55289 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDH12P55289 U6.112-201ENST00000384129 70 ntBASIC4.94□□□□□ -1.62
CDH12P55289 SNORA16A-201ENST00000384342 137 ntBASIC4.94□□□□□ -1.62
CDH12P55289 RNU6-906P-201ENST00000384700 70 ntBASIC4.94□□□□□ -1.62
CDH12P55289 RNU6-244P-201ENST00000391028 104 ntBASIC4.94□□□□□ -1.62
CDH12P55289 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.94□□□□□ -1.62
CDH12P55289 AL596448.1-201ENST00000415024 392 ntBASIC4.94□□□□□ -1.62
CDH12P55289 HIGD1AP15-201ENST00000416198 280 ntBASIC4.94□□□□□ -1.62
CDH12P55289 BMS1P13-201ENST00000417301 885 ntBASIC4.94□□□□□ -1.62
CDH12P55289 LINC01347-201ENST00000417964 355 ntBASIC4.94□□□□□ -1.62
CDH12P55289 MTND2P16-201ENST00000419987 799 ntBASIC4.94□□□□□ -1.62
CDH12P55289 PTP4A1P1-201ENST00000420539 515 ntBASIC4.94□□□□□ -1.62
CDH12P55289 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CDH12P55289 GAPDHP34-201ENST00000432112 823 ntBASIC4.94□□□□□ -1.62
CDH12P55289 RPL12P17-201ENST00000432393 498 ntBASIC4.94□□□□□ -1.62
CDH12P55289 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.94□□□□□ -1.62
CDH12P55289 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
CDH12P55289 RPS4XP6-201ENST00000477670 797 ntBASIC4.94□□□□□ -1.62
CDH12P55289 AC138866.2-201ENST00000508650 584 ntBASIC4.94□□□□□ -1.62
CDH12P55289 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC4.94□□□□□ -1.62
CDH12P55289 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.94□□□□□ -1.62
CDH12P55289 RNU6-311P-201ENST00000516224 102 ntBASIC4.94□□□□□ -1.62
CDH12P55289 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.94□□□□□ -1.62
CDH12P55289 AC022360.1-201ENST00000521058 340 ntBASIC4.94□□□□□ -1.62
CDH12P55289 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CDH12P55289 DUXAP5-201ENST00000529668 529 ntBASIC4.94□□□□□ -1.62
CDH12P55289 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.94□□□□□ -1.62
CDH12P55289 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.94□□□□□ -1.62
CDH12P55289 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CDH12P55289 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.94□□□□□ -1.62
CDH12P55289 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC4.94□□□□□ -1.62
CDH12P55289 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDH12P55289 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.94□□□□□ -1.62
CDH12P55289 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CDH12P55289 AC006349.1-201ENST00000555526 235 ntBASIC4.94□□□□□ -1.62
CDH12P55289 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.94□□□□□ -1.62
CDH12P55289 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.94□□□□□ -1.62
CDH12P55289 AC022884.2-201ENST00000578535 580 ntBASIC4.94□□□□□ -1.62
CDH12P55289 RN7SL356P-201ENST00000582228 248 ntBASIC4.94□□□□□ -1.62
CDH12P55289 REV3L-214ENST00000619481 969 ntTSL 5 BASIC4.94□□□□□ -1.62
CDH12P55289 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.94□□□□□ -1.62
CDH12P55289 AC068057.2-201ENST00000624047 895 ntBASIC4.94□□□□□ -1.62
CDH12P55289 AC011815.3-201ENST00000624194 473 ntBASIC4.94□□□□□ -1.62
CDH12P55289 AC019226.2-201ENST00000625973 424 ntBASIC4.94□□□□□ -1.62
CDH12P55289 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.94□□□□□ -1.62
CDH12P55289 SAMMSON-227ENST00000642114 1199 ntBASIC4.94□□□□□ -1.62
CDH12P55289 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CDH12P55289 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDH12P55289 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDH12P55289 SMG1P4-204ENST00000523028 4131 ntBASIC4.94□□□□□ -1.62
CDH12P55289 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.94□□□□□ -1.62
CDH12P55289 ZNF849P-201ENST00000594711 1566 ntBASIC4.94□□□□□ -1.62
CDH12P55289 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDH12P55289 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
CDH12P55289 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDH12P55289 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.94□□□□□ -1.62
CDH12P55289 AC008079.2-201ENST00000623543 20396 ntBASIC4.93□□□□□ -1.62
CDH12P55289 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CDH12P55289 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.93□□□□□ -1.62
CDH12P55289 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.93□□□□□ -1.62
CDH12P55289 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms