Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC010615.3-201ENST00000597319 394 ntBASIC4.96□□□□□ -1.62
CDH4P55283 AP005212.4-201ENST00000614206 710 ntBASIC4.96□□□□□ -1.62
CDH4P55283 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CDH4P55283 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CDH4P55283 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CDH4P55283 AC053481.2-202ENST00000582394 1500 ntBASIC4.96□□□□□ -1.62
CDH4P55283 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CDH4P55283 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
CDH4P55283 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CDH4P55283 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH4P55283 AC027228.2-201ENST00000567141 2154 ntBASIC4.95□□□□□ -1.62
CDH4P55283 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CDH4P55283 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH4P55283 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH4P55283 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH4P55283 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.95□□□□□ -1.62
CDH4P55283 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH4P55283 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.95□□□□□ -1.62
CDH4P55283 AC004074.1-201ENST00000421810 1063 ntBASIC4.95□□□□□ -1.62
CDH4P55283 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.95□□□□□ -1.62
CDH4P55283 AL121578.1-201ENST00000428051 892 ntBASIC4.95□□□□□ -1.62
CDH4P55283 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH4P55283 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.95□□□□□ -1.62
CDH4P55283 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.95□□□□□ -1.62
CDH4P55283 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.95□□□□□ -1.62
CDH4P55283 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH4P55283 AC104971.1-201ENST00000495117 578 ntBASIC4.95□□□□□ -1.62
CDH4P55283 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CDH4P55283 SCARNA22-201ENST00000503991 125 ntBASIC4.95□□□□□ -1.62
CDH4P55283 OR7H2P-201ENST00000513483 306 ntBASIC4.95□□□□□ -1.62
CDH4P55283 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.95□□□□□ -1.62
CDH4P55283 AP006245.2-201ENST00000522004 300 ntBASIC4.95□□□□□ -1.62
CDH4P55283 HNRNPRP2-201ENST00000528421 743 ntBASIC4.95□□□□□ -1.62
CDH4P55283 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.95□□□□□ -1.62
CDH4P55283 AC008147.3-201ENST00000548666 354 ntBASIC4.95□□□□□ -1.62
CDH4P55283 AC133555.2-201ENST00000550213 292 ntBASIC4.95□□□□□ -1.62
CDH4P55283 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.95□□□□□ -1.62
CDH4P55283 MIR4675-201ENST00000577898 77 ntBASIC4.95□□□□□ -1.62
CDH4P55283 MIR5699-201ENST00000578903 90 ntBASIC4.95□□□□□ -1.62
CDH4P55283 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.95□□□□□ -1.62
CDH4P55283 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CDH4P55283 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.95□□□□□ -1.62
CDH4P55283 AC012414.7-202ENST00000622705 1090 ntBASIC4.95□□□□□ -1.62
CDH4P55283 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.95□□□□□ -1.62
CDH4P55283 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.95□□□□□ -1.62
CDH4P55283 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.95□□□□□ -1.62
CDH4P55283 AC006453.5-201ENST00000636451 619 ntBASIC4.95□□□□□ -1.62
CDH4P55283 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH4P55283 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CDH4P55283 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH4P55283 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CDH4P55283 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH4P55283 TLK1P1-201ENST00000456760 2440 ntBASIC4.95□□□□□ -1.62
CDH4P55283 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH4P55283 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CDH4P55283 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDH4P55283 AC073136.1-201ENST00000449426 2884 ntBASIC4.94□□□□□ -1.62
CDH4P55283 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CDH4P55283 AC100778.3-201ENST00000580060 1750 ntBASIC4.94□□□□□ -1.62
CDH4P55283 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.94□□□□□ -1.62
CDH4P55283 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.94□□□□□ -1.62
CDH4P55283 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.94□□□□□ -1.62
CDH4P55283 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDH4P55283 RN7SKP97-201ENST00000410966 333 ntBASIC4.94□□□□□ -1.62
CDH4P55283 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.94□□□□□ -1.62
CDH4P55283 BX510359.2-201ENST00000417920 305 ntBASIC4.94□□□□□ -1.62
CDH4P55283 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.94□□□□□ -1.62
CDH4P55283 OR2B7P-201ENST00000429302 934 ntBASIC4.94□□□□□ -1.62
CDH4P55283 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.94□□□□□ -1.62
CDH4P55283 OR6C72P-201ENST00000451403 892 ntBASIC4.94□□□□□ -1.62
CDH4P55283 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
CDH4P55283 RN7SKP276-201ENST00000516242 268 ntBASIC4.94□□□□□ -1.62
CDH4P55283 RNU1-6P-201ENST00000516290 144 ntBASIC4.94□□□□□ -1.62
CDH4P55283 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.94□□□□□ -1.62
CDH4P55283 IGKV1-32-201ENST00000519290 311 ntBASIC4.94□□□□□ -1.62
CDH4P55283 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.94□□□□□ -1.62
CDH4P55283 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.94□□□□□ -1.62
CDH4P55283 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.94□□□□□ -1.62
CDH4P55283 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.94□□□□□ -1.62
CDH4P55283 AC233702.9-201ENST00000581528 203 ntBASIC4.94□□□□□ -1.62
CDH4P55283 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.94□□□□□ -1.62
CDH4P55283 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.94□□□□□ -1.62
CDH4P55283 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.94□□□□□ -1.62
CDH4P55283 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.94□□□□□ -1.62
CDH4P55283 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDH4P55283 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CDH4P55283 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.94□□□□□ -1.62
CDH4P55283 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CDH4P55283 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.94□□□□□ -1.62
CDH4P55283 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.94□□□□□ -1.62
CDH4P55283 AL606537.1-201ENST00000607258 2011 ntBASIC4.94□□□□□ -1.62
CDH4P55283 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.94□□□□□ -1.62
CDH4P55283 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDH4P55283 AC007382.1-201ENST00000624376 2618 ntBASIC4.93□□□□□ -1.62
CDH4P55283 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CDH4P55283 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDH4P55283 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CDH4P55283 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.93□□□□□ -1.62
CDH4P55283 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CDH4P55283 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 143.1 ms