Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.93□□□□□ -1.3
USP11P51784 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.93□□□□□ -1.3
USP11P51784 AC090651.1-201ENST00000567865 634 ntBASIC6.93□□□□□ -1.3
USP11P51784 AL121757.2-201ENST00000611223 313 ntBASIC6.93□□□□□ -1.3
USP11P51784 AC063943.3-201ENST00000615562 356 ntBASIC6.93□□□□□ -1.3
USP11P51784 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
USP11P51784 PCMTD1P7-201ENST00000634506 357 ntBASIC6.93□□□□□ -1.3
USP11P51784 AC116618.1-201ENST00000634617 774 ntBASIC6.93□□□□□ -1.3
USP11P51784 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.93□□□□□ -1.3
USP11P51784 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.93□□□□□ -1.3
USP11P51784 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.93□□□□□ -1.3
USP11P51784 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
USP11P51784 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.93□□□□□ -1.3
USP11P51784 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
USP11P51784 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
USP11P51784 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
USP11P51784 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
USP11P51784 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
USP11P51784 AC017007.4-201ENST00000503353 1352 ntBASIC6.93□□□□□ -1.3
USP11P51784 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
USP11P51784 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
USP11P51784 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
USP11P51784 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.93□□□□□ -1.3
USP11P51784 AC093225.1-201ENST00000506867 1408 ntBASIC6.93□□□□□ -1.3
USP11P51784 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
USP11P51784 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
USP11P51784 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
USP11P51784 AL662795.2-201ENST00000624252 3706 ntBASIC6.92□□□□□ -1.3
USP11P51784 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
USP11P51784 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
USP11P51784 RNA5SP375-201ENST00000362975 119 ntBASIC6.92□□□□□ -1.3
USP11P51784 RNU6-931P-201ENST00000363850 107 ntBASIC6.92□□□□□ -1.3
USP11P51784 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
USP11P51784 AL079342.2-201ENST00000403367 482 ntBASIC6.92□□□□□ -1.3
USP11P51784 AC098592.2-201ENST00000413158 265 ntBASIC6.92□□□□□ -1.3
USP11P51784 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC6.92□□□□□ -1.3
USP11P51784 Z99497.1-201ENST00000421282 135 ntBASIC6.92□□□□□ -1.3
USP11P51784 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.92□□□□□ -1.3
USP11P51784 USP9YP18-201ENST00000425912 695 ntBASIC6.92□□□□□ -1.3
USP11P51784 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
USP11P51784 MTCO2P11-201ENST00000431069 680 ntBASIC6.92□□□□□ -1.3
USP11P51784 USP12PX-201ENST00000432383 1057 ntBASIC6.92□□□□□ -1.3
USP11P51784 B3GNT2P1-201ENST00000434960 952 ntBASIC6.92□□□□□ -1.3
USP11P51784 AL590399.4-201ENST00000436561 601 ntBASIC6.92□□□□□ -1.3
USP11P51784 AMYP1-201ENST00000440059 1023 ntBASIC6.92□□□□□ -1.3
USP11P51784 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC6.92□□□□□ -1.3
USP11P51784 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC6.92□□□□□ -1.3
USP11P51784 AL592437.1-201ENST00000443781 492 ntBASIC6.92□□□□□ -1.3
USP11P51784 RPL21P134-201ENST00000453468 483 ntBASIC6.92□□□□□ -1.3
USP11P51784 PPIAP27-201ENST00000453800 265 ntBASIC6.92□□□□□ -1.3
USP11P51784 AC023194.2-201ENST00000465398 406 ntBASIC6.92□□□□□ -1.3
USP11P51784 AC135999.1-201ENST00000478962 479 ntBASIC6.92□□□□□ -1.3
USP11P51784 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC6.92□□□□□ -1.3
USP11P51784 AC147055.4-201ENST00000504399 745 ntBASIC6.92□□□□□ -1.3
USP11P51784 TOMM20P1-201ENST00000534518 427 ntBASIC6.92□□□□□ -1.3
USP11P51784 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.92□□□□□ -1.3
USP11P51784 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.92□□□□□ -1.3
USP11P51784 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC6.92□□□□□ -1.3
USP11P51784 AC134669.1-201ENST00000581275 672 ntBASIC6.92□□□□□ -1.3
USP11P51784 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC6.92□□□□□ -1.3
USP11P51784 AC008507.3-201ENST00000585753 472 ntBASIC6.92□□□□□ -1.3
USP11P51784 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.92□□□□□ -1.3
USP11P51784 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
USP11P51784 AC119403.2-201ENST00000590960 598 ntBASIC6.92□□□□□ -1.3
USP11P51784 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.92□□□□□ -1.3
USP11P51784 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC6.92□□□□□ -1.3
USP11P51784 EIF1P6-201ENST00000600054 334 ntBASIC6.92□□□□□ -1.3
USP11P51784 SUMO2P14-201ENST00000604488 293 ntBASIC6.92□□□□□ -1.3
USP11P51784 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.92□□□□□ -1.3
USP11P51784 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
USP11P51784 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.92□□□□□ -1.3
USP11P51784 AC135068.5-201ENST00000624197 983 ntBASIC6.92□□□□□ -1.3
USP11P51784 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.92□□□□□ -1.3
USP11P51784 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
USP11P51784 AC068769.1-201ENST00000474767 2426 ntBASIC6.92□□□□□ -1.3
USP11P51784 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
USP11P51784 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
USP11P51784 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
USP11P51784 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
USP11P51784 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
USP11P51784 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.92□□□□□ -1.3
USP11P51784 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
USP11P51784 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.92□□□□□ -1.3
USP11P51784 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
USP11P51784 IFIT1P1-201ENST00000400497 1449 ntBASIC6.92□□□□□ -1.3
USP11P51784 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.92□□□□□ -1.3
USP11P51784 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
USP11P51784 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.92□□□□□ -1.3
USP11P51784 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
USP11P51784 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
USP11P51784 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.91□□□□□ -1.3
USP11P51784 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
USP11P51784 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.91□□□□□ -1.3
USP11P51784 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.91□□□□□ -1.3
USP11P51784 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
USP11P51784 HSPD1P8-201ENST00000400121 1658 ntBASIC6.91□□□□□ -1.3
USP11P51784 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
USP11P51784 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.91□□□□□ -1.3
USP11P51784 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
USP11P51784 AC000367.1-201ENST00000452711 1766 ntBASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms