Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AP004609.2-201ENST00000532177 190 ntBASIC4.91□□□□□ -1.62
SOX2P48431 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SOX2P48431 GCSHP4-201ENST00000538792 439 ntBASIC4.91□□□□□ -1.62
SOX2P48431 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC4.91□□□□□ -1.62
SOX2P48431 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC4.91□□□□□ -1.62
SOX2P48431 AC006530.1-201ENST00000555980 571 ntBASIC4.91□□□□□ -1.62
SOX2P48431 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.91□□□□□ -1.62
SOX2P48431 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.91□□□□□ -1.62
SOX2P48431 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.91□□□□□ -1.62
SOX2P48431 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.91□□□□□ -1.62
SOX2P48431 AC109446.2-201ENST00000567872 497 ntBASIC4.91□□□□□ -1.62
SOX2P48431 RN7SL230P-201ENST00000580835 303 ntBASIC4.91□□□□□ -1.62
SOX2P48431 MIR4260-201ENST00000583107 67 ntBASIC4.91□□□□□ -1.62
SOX2P48431 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SOX2P48431 TEX41-218ENST00000596540 882 ntTSL 5 BASIC4.91□□□□□ -1.62
SOX2P48431 Z99497.2-201ENST00000603634 310 ntBASIC4.91□□□□□ -1.62
SOX2P48431 AC010245.2-201ENST00000606908 1167 ntBASIC4.91□□□□□ -1.62
SOX2P48431 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SOX2P48431 U6.107-201ENST00000637108 79 ntBASIC4.91□□□□□ -1.62
SOX2P48431 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SOX2P48431 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SOX2P48431 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SOX2P48431 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SOX2P48431 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SOX2P48431 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SOX2P48431 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SOX2P48431 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.91□□□□□ -1.62
SOX2P48431 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.91□□□□□ -1.62
SOX2P48431 AC027088.4-201ENST00000611559 1947 ntBASIC4.91□□□□□ -1.62
SOX2P48431 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SOX2P48431 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SOX2P48431 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SOX2P48431 AL513185.3-201ENST00000433335 1300 ntBASIC4.91□□□□□ -1.62
SOX2P48431 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.91□□□□□ -1.62
SOX2P48431 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.91□□□□□ -1.62
SOX2P48431 AL034549.2-201ENST00000618285 3373 ntBASIC4.91□□□□□ -1.62
SOX2P48431 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
SOX2P48431 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
SOX2P48431 AF287957.1-201ENST00000607368 1595 ntBASIC4.91□□□□□ -1.62
SOX2P48431 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SOX2P48431 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.9□□□□□ -1.62
SOX2P48431 BX005019.1-201ENST00000561881 1810 ntBASIC4.9□□□□□ -1.62
SOX2P48431 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC4.9□□□□□ -1.62
SOX2P48431 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SOX2P48431 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.9□□□□□ -1.62
SOX2P48431 AC006484.1-201ENST00000435086 1884 ntBASIC4.9□□□□□ -1.62
SOX2P48431 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SOX2P48431 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.9□□□□□ -1.62
SOX2P48431 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SOX2P48431 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SOX2P48431 FAM133CP-201ENST00000332869 704 ntBASIC4.9□□□□□ -1.63
SOX2P48431 SNORD116.1-201ENST00000365628 92 ntBASIC4.9□□□□□ -1.63
SOX2P48431 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.9□□□□□ -1.63
SOX2P48431 RNU6-729P-201ENST00000384399 107 ntBASIC4.9□□□□□ -1.63
SOX2P48431 RNU6-83P-201ENST00000384568 112 ntBASIC4.9□□□□□ -1.63
SOX2P48431 MIR551B-201ENST00000384984 96 ntBASIC4.9□□□□□ -1.63
SOX2P48431 SNORA40.2-201ENST00000390847 128 ntBASIC4.9□□□□□ -1.63
SOX2P48431 OOSP1-201ENST00000398992 1270 ntBASIC4.9□□□□□ -1.63
SOX2P48431 AL079342.2-201ENST00000403367 482 ntBASIC4.9□□□□□ -1.63
SOX2P48431 AC092745.2-202ENST00000411880 369 ntBASIC4.9□□□□□ -1.63
SOX2P48431 RNF10P1-201ENST00000418589 369 ntBASIC4.9□□□□□ -1.63
SOX2P48431 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.9□□□□□ -1.63
SOX2P48431 AC090960.1-201ENST00000421072 306 ntBASIC4.9□□□□□ -1.63
SOX2P48431 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.9□□□□□ -1.63
SOX2P48431 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4.9□□□□□ -1.63
SOX2P48431 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.9□□□□□ -1.63
SOX2P48431 RPL5P25-201ENST00000441148 775 ntBASIC4.9□□□□□ -1.63
SOX2P48431 AL356121.1-201ENST00000442911 156 ntBASIC4.9□□□□□ -1.63
SOX2P48431 AURKAPS1-201ENST00000451805 1212 ntBASIC4.9□□□□□ -1.63
SOX2P48431 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SOX2P48431 RPL7P48-201ENST00000461513 746 ntBASIC4.9□□□□□ -1.63
SOX2P48431 RPL7P40-201ENST00000481703 745 ntBASIC4.9□□□□□ -1.63
SOX2P48431 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.9□□□□□ -1.63
SOX2P48431 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.9□□□□□ -1.63
SOX2P48431 AC021193.1-201ENST00000511607 420 ntBASIC4.9□□□□□ -1.63
SOX2P48431 OR5H7P-201ENST00000514084 930 ntBASIC4.9□□□□□ -1.63
SOX2P48431 PRMT5P1-201ENST00000514351 598 ntBASIC4.9□□□□□ -1.63
SOX2P48431 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SOX2P48431 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC4.9□□□□□ -1.63
SOX2P48431 PCNAP4-201ENST00000532690 730 ntBASIC4.9□□□□□ -1.63
SOX2P48431 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC4.9□□□□□ -1.63
SOX2P48431 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC4.9□□□□□ -1.63
SOX2P48431 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.9□□□□□ -1.63
SOX2P48431 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4.9□□□□□ -1.63
SOX2P48431 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.9□□□□□ -1.63
SOX2P48431 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC4.9□□□□□ -1.63
SOX2P48431 RPA2P1-201ENST00000556557 721 ntBASIC4.9□□□□□ -1.63
SOX2P48431 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC4.9□□□□□ -1.63
SOX2P48431 PIGPP4-201ENST00000584447 307 ntBASIC4.9□□□□□ -1.63
SOX2P48431 AC010487.1-201ENST00000594408 1172 ntBASIC4.9□□□□□ -1.63
SOX2P48431 MRPS35P3-201ENST00000603189 709 ntBASIC4.9□□□□□ -1.63
SOX2P48431 FAM27E4-201ENST00000605259 342 ntBASIC4.9□□□□□ -1.63
SOX2P48431 AL360219.1-201ENST00000610230 366 ntBASIC4.9□□□□□ -1.63
SOX2P48431 AP000255.1-201ENST00000610276 676 ntBASIC4.9□□□□□ -1.63
SOX2P48431 uc_338.31-201ENST00000615595 186 ntBASIC4.9□□□□□ -1.63
SOX2P48431 MIR6721-201ENST00000617181 87 ntBASIC4.9□□□□□ -1.63
SOX2P48431 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SOX2P48431 AL158163.2-201ENST00000619110 700 ntBASIC4.9□□□□□ -1.63
SOX2P48431 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.9□□□□□ -1.63
SOX2P48431 AC005899.6-201ENST00000620729 297 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms