Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.84□□□□□ -1.63
SLC6A12P48065 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SLC6A12P48065 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SLC6A12P48065 SNORA73.1-201ENST00000363107 205 ntBASIC4.84□□□□□ -1.63
SLC6A12P48065 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
SLC6A12P48065 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
SLC6A12P48065 SNORA70.10-201ENST00000384515 134 ntBASIC4.84□□□□□ -1.63
SLC6A12P48065 SNORA66-201ENST00000384792 133 ntBASIC4.84□□□□□ -1.63
SLC6A12P48065 SPTLC1P2-201ENST00000407089 121 ntBASIC4.84□□□□□ -1.63
SLC6A12P48065 RPS26P13-201ENST00000419030 330 ntBASIC4.84□□□□□ -1.63
SLC6A12P48065 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.84□□□□□ -1.63
SLC6A12P48065 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.84□□□□□ -1.63
SLC6A12P48065 RHOT1P3-201ENST00000436571 331 ntBASIC4.84□□□□□ -1.63
SLC6A12P48065 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.84□□□□□ -1.63
SLC6A12P48065 GTF3AP5-201ENST00000442645 697 ntBASIC4.84□□□□□ -1.63
SLC6A12P48065 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.84□□□□□ -1.63
SLC6A12P48065 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.84□□□□□ -1.63
SLC6A12P48065 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.84□□□□□ -1.63
SLC6A12P48065 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.84□□□□□ -1.63
SLC6A12P48065 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.84□□□□□ -1.63
SLC6A12P48065 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.84□□□□□ -1.63
SLC6A12P48065 AC106806.2-201ENST00000509365 500 ntBASIC4.84□□□□□ -1.63
SLC6A12P48065 COX6B1P5-201ENST00000509843 249 ntBASIC4.84□□□□□ -1.63
SLC6A12P48065 ENPP7P9-201ENST00000514456 627 ntBASIC4.84□□□□□ -1.63
SLC6A12P48065 SNORA26.10-201ENST00000516427 141 ntBASIC4.84□□□□□ -1.63
SLC6A12P48065 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.84□□□□□ -1.63
SLC6A12P48065 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.84□□□□□ -1.63
SLC6A12P48065 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SLC6A12P48065 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.84□□□□□ -1.63
SLC6A12P48065 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.84□□□□□ -1.63
SLC6A12P48065 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.84□□□□□ -1.63
SLC6A12P48065 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.84□□□□□ -1.63
SLC6A12P48065 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.84□□□□□ -1.63
SLC6A12P48065 AC040174.2-201ENST00000602701 465 ntBASIC4.84□□□□□ -1.63
SLC6A12P48065 AC104687.2-201ENST00000604442 342 ntBASIC4.84□□□□□ -1.63
SLC6A12P48065 AP004372.1-201ENST00000604842 844 ntBASIC4.84□□□□□ -1.63
SLC6A12P48065 AC211433.2-201ENST00000608433 387 ntBASIC4.84□□□□□ -1.63
SLC6A12P48065 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.84□□□□□ -1.63
SLC6A12P48065 AC016769.4-201ENST00000616893 535 ntBASIC4.84□□□□□ -1.63
SLC6A12P48065 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SLC6A12P48065 AC015914.2-201ENST00000618167 288 ntBASIC4.84□□□□□ -1.63
SLC6A12P48065 AC006453.5-201ENST00000636451 619 ntBASIC4.84□□□□□ -1.63
SLC6A12P48065 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.84□□□□□ -1.63
SLC6A12P48065 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
SLC6A12P48065 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
SLC6A12P48065 AL138820.1-201ENST00000617901 5305 ntBASIC4.84□□□□□ -1.63
SLC6A12P48065 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SLC6A12P48065 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SLC6A12P48065 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.64
SLC6A12P48065 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SLC6A12P48065 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
SLC6A12P48065 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
SLC6A12P48065 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.84□□□□□ -1.64
SLC6A12P48065 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
SLC6A12P48065 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.64
SLC6A12P48065 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SLC6A12P48065 AC112198.2-201ENST00000426589 6996 ntBASIC4.83□□□□□ -1.64
SLC6A12P48065 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SLC6A12P48065 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SLC6A12P48065 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SLC6A12P48065 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.83□□□□□ -1.64
SLC6A12P48065 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SLC6A12P48065 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SLC6A12P48065 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SLC6A12P48065 RNU1-106P-201ENST00000384382 164 ntBASIC4.83□□□□□ -1.64
SLC6A12P48065 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SLC6A12P48065 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.83□□□□□ -1.64
SLC6A12P48065 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.83□□□□□ -1.64
SLC6A12P48065 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.83□□□□□ -1.64
SLC6A12P48065 OR5M12P-201ENST00000423388 929 ntBASIC4.83□□□□□ -1.64
SLC6A12P48065 HSFY1P1-201ENST00000423928 1178 ntBASIC4.83□□□□□ -1.64
SLC6A12P48065 AL445528.1-201ENST00000426330 420 ntBASIC4.83□□□□□ -1.64
SLC6A12P48065 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.83□□□□□ -1.64
SLC6A12P48065 AL606490.7-201ENST00000433136 191 ntBASIC4.83□□□□□ -1.64
SLC6A12P48065 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.83□□□□□ -1.64
SLC6A12P48065 AL691517.1-201ENST00000440833 1235 ntBASIC4.83□□□□□ -1.64
SLC6A12P48065 AL353898.1-201ENST00000444055 238 ntBASIC4.83□□□□□ -1.64
SLC6A12P48065 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SLC6A12P48065 CASP3P1-201ENST00000446037 609 ntBASIC4.83□□□□□ -1.64
SLC6A12P48065 AC012512.1-201ENST00000446594 718 ntBASIC4.83□□□□□ -1.64
SLC6A12P48065 AL627224.1-201ENST00000448334 444 ntBASIC4.83□□□□□ -1.64
SLC6A12P48065 AL353718.1-201ENST00000451028 517 ntBASIC4.83□□□□□ -1.64
SLC6A12P48065 AC093166.2-201ENST00000455969 1017 ntBASIC4.83□□□□□ -1.64
SLC6A12P48065 RPS18P6-201ENST00000476880 458 ntBASIC4.83□□□□□ -1.64
SLC6A12P48065 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.83□□□□□ -1.64
SLC6A12P48065 FABP5P6-201ENST00000510588 409 ntBASIC4.83□□□□□ -1.64
SLC6A12P48065 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.83□□□□□ -1.64
SLC6A12P48065 SETP12-201ENST00000514068 805 ntBASIC4.83□□□□□ -1.64
SLC6A12P48065 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.83□□□□□ -1.64
SLC6A12P48065 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.83□□□□□ -1.64
SLC6A12P48065 AC005868.1-201ENST00000536421 331 ntBASIC4.83□□□□□ -1.64
SLC6A12P48065 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.83□□□□□ -1.64
SLC6A12P48065 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SLC6A12P48065 LSM3P2-201ENST00000551246 273 ntBASIC4.83□□□□□ -1.64
SLC6A12P48065 CR383656.14-201ENST00000551951 406 ntBASIC4.83□□□□□ -1.64
SLC6A12P48065 AL049830.4-201ENST00000555149 351 ntBASIC4.83□□□□□ -1.64
SLC6A12P48065 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.83□□□□□ -1.64
SLC6A12P48065 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SLC6A12P48065 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.83□□□□□ -1.64
SLC6A12P48065 MIMT1-201ENST00000597105 1050 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms