Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
APOBEC1P41238 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.78□□□□□ -1.64
APOBEC1P41238 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.78□□□□□ -1.64
APOBEC1P41238 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.78□□□□□ -1.64
APOBEC1P41238 AL121594.4-201ENST00000556211 1196 ntBASIC4.78□□□□□ -1.64
APOBEC1P41238 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.78□□□□□ -1.64
APOBEC1P41238 MIR4660-201ENST00000583549 74 ntBASIC4.78□□□□□ -1.64
APOBEC1P41238 AC012254.4-201ENST00000588843 273 ntBASIC4.78□□□□□ -1.64
APOBEC1P41238 FKBP1AP1-201ENST00000594588 318 ntBASIC4.78□□□□□ -1.64
APOBEC1P41238 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.78□□□□□ -1.64
APOBEC1P41238 AC011374.2-201ENST00000607135 526 ntBASIC4.78□□□□□ -1.64
APOBEC1P41238 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.78□□□□□ -1.64
APOBEC1P41238 MIR6839-201ENST00000620425 113 ntBASIC4.78□□□□□ -1.64
APOBEC1P41238 AC011815.3-201ENST00000624194 473 ntBASIC4.78□□□□□ -1.64
APOBEC1P41238 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.78□□□□□ -1.64
APOBEC1P41238 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
APOBEC1P41238 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
APOBEC1P41238 AL031595.2-201ENST00000624215 19071 ntBASIC4.78□□□□□ -1.64
APOBEC1P41238 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
APOBEC1P41238 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
APOBEC1P41238 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
APOBEC1P41238 MTCO1P18-201ENST00000455518 1419 ntBASIC4.78□□□□□ -1.64
APOBEC1P41238 AC133552.1-201ENST00000569988 4007 ntBASIC4.78□□□□□ -1.64
APOBEC1P41238 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
APOBEC1P41238 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
APOBEC1P41238 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
APOBEC1P41238 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
APOBEC1P41238 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
APOBEC1P41238 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
APOBEC1P41238 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
APOBEC1P41238 AC010266.2-201ENST00000564741 3255 ntBASIC4.77□□□□□ -1.65
APOBEC1P41238 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.77□□□□□ -1.65
APOBEC1P41238 AL132640.2-201ENST00000559968 1698 ntBASIC4.77□□□□□ -1.65
APOBEC1P41238 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.77□□□□□ -1.65
APOBEC1P41238 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
APOBEC1P41238 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
APOBEC1P41238 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.77□□□□□ -1.65
APOBEC1P41238 RN7SKP162-201ENST00000363605 345 ntBASIC4.77□□□□□ -1.65
APOBEC1P41238 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.77□□□□□ -1.65
APOBEC1P41238 PCNPP4-201ENST00000414817 517 ntBASIC4.77□□□□□ -1.65
APOBEC1P41238 SLC35E1P1-201ENST00000419313 864 ntBASIC4.77□□□□□ -1.65
APOBEC1P41238 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.77□□□□□ -1.65
APOBEC1P41238 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.77□□□□□ -1.65
APOBEC1P41238 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.77□□□□□ -1.65
APOBEC1P41238 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.77□□□□□ -1.65
APOBEC1P41238 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.77□□□□□ -1.65
APOBEC1P41238 CLUHP1-201ENST00000435012 1190 ntBASIC4.77□□□□□ -1.65
APOBEC1P41238 ARF4P4-201ENST00000439608 520 ntBASIC4.77□□□□□ -1.65
APOBEC1P41238 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.77□□□□□ -1.65
APOBEC1P41238 AL096803.2-201ENST00000450032 677 ntBASIC4.77□□□□□ -1.65
APOBEC1P41238 SEPT7P3-201ENST00000455017 621 ntBASIC4.77□□□□□ -1.65
APOBEC1P41238 HMGB1P38-201ENST00000490557 577 ntBASIC4.77□□□□□ -1.65
APOBEC1P41238 RPS4XP20-201ENST00000505751 772 ntBASIC4.77□□□□□ -1.65
APOBEC1P41238 AC010460.2-201ENST00000509054 677 ntBASIC4.77□□□□□ -1.65
APOBEC1P41238 AC016559.2-201ENST00000510759 359 ntBASIC4.77□□□□□ -1.65
APOBEC1P41238 EIF3KP3-201ENST00000514461 639 ntBASIC4.77□□□□□ -1.65
APOBEC1P41238 RNU6-941P-201ENST00000516346 108 ntBASIC4.77□□□□□ -1.65
APOBEC1P41238 RNA5SP230-201ENST00000517039 122 ntBASIC4.77□□□□□ -1.65
APOBEC1P41238 RNA5SP373-201ENST00000517271 95 ntBASIC4.77□□□□□ -1.65
APOBEC1P41238 AC012400.1-201ENST00000518452 381 ntBASIC4.77□□□□□ -1.65
APOBEC1P41238 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.77□□□□□ -1.65
APOBEC1P41238 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.77□□□□□ -1.65
APOBEC1P41238 CYB5AP5-201ENST00000549779 389 ntBASIC4.77□□□□□ -1.65
APOBEC1P41238 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.77□□□□□ -1.65
APOBEC1P41238 AC007225.2-201ENST00000562529 256 ntBASIC4.77□□□□□ -1.65
APOBEC1P41238 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.77□□□□□ -1.65
APOBEC1P41238 AC122134.1-201ENST00000565664 1104 ntBASIC4.77□□□□□ -1.65
APOBEC1P41238 MTND1P8-201ENST00000571424 950 ntBASIC4.77□□□□□ -1.65
APOBEC1P41238 RN7SL708P-201ENST00000580952 299 ntBASIC4.77□□□□□ -1.65
APOBEC1P41238 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.77□□□□□ -1.65
APOBEC1P41238 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.77□□□□□ -1.65
APOBEC1P41238 AC069307.1-201ENST00000602820 447 ntBASIC4.77□□□□□ -1.65
APOBEC1P41238 AC099785.1-201ENST00000605697 437 ntBASIC4.77□□□□□ -1.65
APOBEC1P41238 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
APOBEC1P41238 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.77□□□□□ -1.65
APOBEC1P41238 AC136428.4-201ENST00000634254 1155 ntBASIC4.77□□□□□ -1.65
APOBEC1P41238 AC135068.12-201ENST00000637370 931 ntBASIC4.77□□□□□ -1.65
APOBEC1P41238 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
APOBEC1P41238 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.77□□□□□ -1.65
APOBEC1P41238 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.77□□□□□ -1.65
APOBEC1P41238 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
APOBEC1P41238 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.77□□□□□ -1.65
APOBEC1P41238 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
APOBEC1P41238 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
APOBEC1P41238 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
APOBEC1P41238 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
APOBEC1P41238 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
APOBEC1P41238 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
APOBEC1P41238 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.77□□□□□ -1.65
APOBEC1P41238 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
APOBEC1P41238 AC092747.4-201ENST00000620519 1861 ntBASIC4.77□□□□□ -1.65
APOBEC1P41238 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.77□□□□□ -1.65
APOBEC1P41238 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
APOBEC1P41238 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
APOBEC1P41238 AC112198.2-201ENST00000426589 6996 ntBASIC4.76□□□□□ -1.65
APOBEC1P41238 NXF4-202ENST00000416098 1465 ntBASIC4.76□□□□□ -1.65
APOBEC1P41238 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
APOBEC1P41238 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.76□□□□□ -1.65
APOBEC1P41238 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
APOBEC1P41238 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms