Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.6□□□□□ -1.51
SCN4AP35499 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SCN4AP35499 AL356863.1-201ENST00000623378 1080 ntBASIC5.6□□□□□ -1.51
SCN4AP35499 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.6□□□□□ -1.51
SCN4AP35499 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SCN4AP35499 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SCN4AP35499 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SCN4AP35499 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.6□□□□□ -1.51
SCN4AP35499 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SCN4AP35499 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC5.6□□□□□ -1.51
SCN4AP35499 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SCN4AP35499 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SCN4AP35499 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SCN4AP35499 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SCN4AP35499 AMZ2P2-201ENST00000406819 1057 ntBASIC5.6□□□□□ -1.51
SCN4AP35499 SNORA11.2-201ENST00000408318 127 ntBASIC5.6□□□□□ -1.51
SCN4AP35499 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.6□□□□□ -1.51
SCN4AP35499 GAPDHP14-201ENST00000450472 937 ntBASIC5.6□□□□□ -1.51
SCN4AP35499 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.6□□□□□ -1.51
SCN4AP35499 ENPP7P11-201ENST00000505915 627 ntBASIC5.6□□□□□ -1.51
SCN4AP35499 AC023632.4-201ENST00000517783 191 ntBASIC5.6□□□□□ -1.51
SCN4AP35499 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.6□□□□□ -1.51
SCN4AP35499 AL161756.2-201ENST00000604597 246 ntBASIC5.6□□□□□ -1.51
SCN4AP35499 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.6□□□□□ -1.51
SCN4AP35499 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SCN4AP35499 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.59□□□□□ -1.51
SCN4AP35499 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.59□□□□□ -1.51
SCN4AP35499 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SCN4AP35499 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SCN4AP35499 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SCN4AP35499 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
SCN4AP35499 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SCN4AP35499 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SCN4AP35499 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SCN4AP35499 AC003985.2-201ENST00000562268 1669 ntBASIC5.59□□□□□ -1.51
SCN4AP35499 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.59□□□□□ -1.51
SCN4AP35499 QRSL1P2-201ENST00000418582 964 ntBASIC5.59□□□□□ -1.51
SCN4AP35499 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.59□□□□□ -1.51
SCN4AP35499 AC046176.1-201ENST00000435260 1170 ntBASIC5.59□□□□□ -1.51
SCN4AP35499 DEFB109A-201ENST00000482450 265 ntBASIC5.59□□□□□ -1.51
SCN4AP35499 AC041039.1-201ENST00000485656 536 ntBASIC5.59□□□□□ -1.51
SCN4AP35499 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.59□□□□□ -1.51
SCN4AP35499 AL359219.2-201ENST00000555184 348 ntBASIC5.59□□□□□ -1.51
SCN4AP35499 RN7SL703P-201ENST00000578485 302 ntBASIC5.59□□□□□ -1.51
SCN4AP35499 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.59□□□□□ -1.51
SCN4AP35499 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
SCN4AP35499 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SCN4AP35499 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SCN4AP35499 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.59□□□□□ -1.52
SCN4AP35499 AL731532.1-201ENST00000623972 4236 ntBASIC5.59□□□□□ -1.52
SCN4AP35499 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
SCN4AP35499 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
SCN4AP35499 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.58□□□□□ -1.52
SCN4AP35499 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SCN4AP35499 MIR670-201ENST00000390142 98 ntBASIC5.58□□□□□ -1.52
SCN4AP35499 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.58□□□□□ -1.52
SCN4AP35499 COX6CP15-201ENST00000426313 211 ntBASIC5.58□□□□□ -1.52
SCN4AP35499 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SCN4AP35499 AC079804.1-201ENST00000461922 436 ntBASIC5.58□□□□□ -1.52
SCN4AP35499 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.58□□□□□ -1.52
SCN4AP35499 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SCN4AP35499 RNA5SP230-201ENST00000517039 122 ntBASIC5.58□□□□□ -1.52
SCN4AP35499 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC5.58□□□□□ -1.52
SCN4AP35499 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.58□□□□□ -1.52
SCN4AP35499 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.58□□□□□ -1.52
SCN4AP35499 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.58□□□□□ -1.52
SCN4AP35499 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.58□□□□□ -1.52
SCN4AP35499 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
SCN4AP35499 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SCN4AP35499 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
SCN4AP35499 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SCN4AP35499 MFSD8-242ENST00000641690 4199 ntBASIC5.58□□□□□ -1.52
SCN4AP35499 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.58□□□□□ -1.52
SCN4AP35499 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SCN4AP35499 AL590762.2-201ENST00000395798 571 ntBASIC5.58□□□□□ -1.52
SCN4AP35499 ATP5F1P3-201ENST00000397213 657 ntBASIC5.58□□□□□ -1.52
SCN4AP35499 RPL21P67-201ENST00000402896 478 ntBASIC5.58□□□□□ -1.52
SCN4AP35499 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.58□□□□□ -1.52
SCN4AP35499 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.58□□□□□ -1.52
SCN4AP35499 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.58□□□□□ -1.52
SCN4AP35499 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.58□□□□□ -1.52
SCN4AP35499 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.58□□□□□ -1.52
SCN4AP35499 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.58□□□□□ -1.52
SCN4AP35499 SNORA74C-1-201ENST00000580726 201 ntBASIC5.58□□□□□ -1.52
SCN4AP35499 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.58□□□□□ -1.52
SCN4AP35499 AC008739.3-201ENST00000603262 127 ntBASIC5.58□□□□□ -1.52
SCN4AP35499 OR7A19P-201ENST00000608051 733 ntBASIC5.58□□□□□ -1.52
SCN4AP35499 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
SCN4AP35499 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.57□□□□□ -1.52
SCN4AP35499 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SCN4AP35499 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SCN4AP35499 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SCN4AP35499 SCARNA15-201ENST00000607520 4325 ntBASIC5.57□□□□□ -1.52
SCN4AP35499 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
SCN4AP35499 RN7SKP202-201ENST00000410439 330 ntBASIC5.57□□□□□ -1.52
SCN4AP35499 RAB9AP4-201ENST00000415230 609 ntBASIC5.57□□□□□ -1.52
SCN4AP35499 FTH1P16-201ENST00000435241 552 ntBASIC5.57□□□□□ -1.52
SCN4AP35499 RPL7L1P8-201ENST00000469911 741 ntBASIC5.57□□□□□ -1.52
SCN4AP35499 AC069304.1-201ENST00000491593 704 ntBASIC5.57□□□□□ -1.52
SCN4AP35499 TPT1P3-201ENST00000492841 512 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms