Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.32□□□□□ -1.56
CTNNA1P35221 AC021483.2-201ENST00000567415 758 ntBASIC5.32□□□□□ -1.56
CTNNA1P35221 AC020978.7-201ENST00000575953 1187 ntBASIC5.32□□□□□ -1.56
CTNNA1P35221 AC005229.3-201ENST00000603438 323 ntBASIC5.32□□□□□ -1.56
CTNNA1P35221 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.32□□□□□ -1.56
CTNNA1P35221 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.32□□□□□ -1.56
CTNNA1P35221 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.32□□□□□ -1.56
CTNNA1P35221 AP000542.2-201ENST00000623199 6179 ntBASIC5.32□□□□□ -1.56
CTNNA1P35221 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.32□□□□□ -1.56
CTNNA1P35221 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CTNNA1P35221 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.32□□□□□ -1.56
CTNNA1P35221 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CTNNA1P35221 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CTNNA1P35221 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CTNNA1P35221 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.31□□□□□ -1.56
CTNNA1P35221 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.31□□□□□ -1.56
CTNNA1P35221 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CTNNA1P35221 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
CTNNA1P35221 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
CTNNA1P35221 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CTNNA1P35221 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CTNNA1P35221 AC019155.1-201ENST00000382242 574 ntBASIC5.31□□□□□ -1.56
CTNNA1P35221 RNU6-185P-201ENST00000384421 107 ntBASIC5.31□□□□□ -1.56
CTNNA1P35221 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.31□□□□□ -1.56
CTNNA1P35221 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.31□□□□□ -1.56
CTNNA1P35221 AC012519.1-201ENST00000424588 610 ntBASIC5.31□□□□□ -1.56
CTNNA1P35221 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.31□□□□□ -1.56
CTNNA1P35221 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CTNNA1P35221 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.31□□□□□ -1.56
CTNNA1P35221 RPL12P28-201ENST00000430852 489 ntBASIC5.31□□□□□ -1.56
CTNNA1P35221 RPS26P4-201ENST00000431743 355 ntBASIC5.31□□□□□ -1.56
CTNNA1P35221 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.31□□□□□ -1.56
CTNNA1P35221 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.31□□□□□ -1.56
CTNNA1P35221 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.31□□□□□ -1.56
CTNNA1P35221 MTND3P4-201ENST00000453537 303 ntBASIC5.31□□□□□ -1.56
CTNNA1P35221 AC093166.2-201ENST00000455969 1017 ntBASIC5.31□□□□□ -1.56
CTNNA1P35221 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.31□□□□□ -1.56
CTNNA1P35221 RPL7P48-201ENST00000461513 746 ntBASIC5.31□□□□□ -1.56
CTNNA1P35221 RN7SL443P-201ENST00000464331 290 ntBASIC5.31□□□□□ -1.56
CTNNA1P35221 AC107398.1-201ENST00000486904 505 ntBASIC5.31□□□□□ -1.56
CTNNA1P35221 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.31□□□□□ -1.56
CTNNA1P35221 SUMO1P1-201ENST00000497904 306 ntBASIC5.31□□□□□ -1.56
CTNNA1P35221 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.31□□□□□ -1.56
CTNNA1P35221 ENPP7P9-201ENST00000514456 627 ntBASIC5.31□□□□□ -1.56
CTNNA1P35221 AC027308.1-201ENST00000517993 110 ntBASIC5.31□□□□□ -1.56
CTNNA1P35221 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.31□□□□□ -1.56
CTNNA1P35221 AC090312.1-201ENST00000580637 348 ntBASIC5.31□□□□□ -1.56
CTNNA1P35221 MIR3614-201ENST00000581261 86 ntBASIC5.31□□□□□ -1.56
CTNNA1P35221 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.31□□□□□ -1.56
CTNNA1P35221 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.31□□□□□ -1.56
CTNNA1P35221 AL589674.2-201ENST00000604304 337 ntBASIC5.31□□□□□ -1.56
CTNNA1P35221 AC090525.3-201ENST00000605601 189 ntBASIC5.31□□□□□ -1.56
CTNNA1P35221 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.31□□□□□ -1.56
CTNNA1P35221 AC109309.2-201ENST00000612597 332 ntBASIC5.31□□□□□ -1.56
CTNNA1P35221 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.31□□□□□ -1.56
CTNNA1P35221 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CTNNA1P35221 MIR6778-201ENST00000617912 73 ntBASIC5.31□□□□□ -1.56
CTNNA1P35221 AC009704.2-201ENST00000618739 483 ntBASIC5.31□□□□□ -1.56
CTNNA1P35221 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.31□□□□□ -1.56
CTNNA1P35221 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.31□□□□□ -1.56
CTNNA1P35221 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.31□□□□□ -1.56
CTNNA1P35221 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CTNNA1P35221 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CTNNA1P35221 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CTNNA1P35221 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
CTNNA1P35221 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.3□□□□□ -1.56
CTNNA1P35221 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CTNNA1P35221 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CTNNA1P35221 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CTNNA1P35221 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CTNNA1P35221 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.3□□□□□ -1.56
CTNNA1P35221 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.3□□□□□ -1.56
CTNNA1P35221 MIR621-201ENST00000384919 96 ntBASIC5.3□□□□□ -1.56
CTNNA1P35221 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.3□□□□□ -1.56
CTNNA1P35221 AC092570.3-201ENST00000420113 693 ntBASIC5.3□□□□□ -1.56
CTNNA1P35221 AC108075.1-201ENST00000424692 529 ntBASIC5.3□□□□□ -1.56
CTNNA1P35221 NPM1P24-201ENST00000428039 894 ntBASIC5.3□□□□□ -1.56
CTNNA1P35221 TRIM60P13-201ENST00000432350 1283 ntBASIC5.3□□□□□ -1.56
CTNNA1P35221 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.3□□□□□ -1.56
CTNNA1P35221 BX323845.1-201ENST00000432417 179 ntBASIC5.3□□□□□ -1.56
CTNNA1P35221 AL450023.3-201ENST00000440592 271 ntBASIC5.3□□□□□ -1.56
CTNNA1P35221 TXNP5-201ENST00000441043 315 ntBASIC5.3□□□□□ -1.56
CTNNA1P35221 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.3□□□□□ -1.56
CTNNA1P35221 GEMIN8P3-201ENST00000445417 720 ntBASIC5.3□□□□□ -1.56
CTNNA1P35221 GYG1P1-201ENST00000460864 698 ntBASIC5.3□□□□□ -1.56
CTNNA1P35221 RPS17P2-201ENST00000461663 408 ntBASIC5.3□□□□□ -1.56
CTNNA1P35221 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.3□□□□□ -1.56
CTNNA1P35221 RN7SL346P-201ENST00000491561 294 ntBASIC5.3□□□□□ -1.56
CTNNA1P35221 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.3□□□□□ -1.56
CTNNA1P35221 AC073358.1-201ENST00000505671 684 ntBASIC5.3□□□□□ -1.56
CTNNA1P35221 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.3□□□□□ -1.56
CTNNA1P35221 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.3□□□□□ -1.56
CTNNA1P35221 RNA5SP249-201ENST00000516127 99 ntBASIC5.3□□□□□ -1.56
CTNNA1P35221 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.3□□□□□ -1.56
CTNNA1P35221 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.3□□□□□ -1.56
CTNNA1P35221 SETP1-201ENST00000556014 845 ntBASIC5.3□□□□□ -1.56
CTNNA1P35221 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.3□□□□□ -1.56
CTNNA1P35221 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CTNNA1P35221 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CTNNA1P35221 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms