Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.91□□□□□ -1.46
HOXC12P31275 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXC12P31275 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC5.91□□□□□ -1.46
HOXC12P31275 EIF1P1-201ENST00000421436 341 ntBASIC5.91□□□□□ -1.46
HOXC12P31275 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.91□□□□□ -1.46
HOXC12P31275 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.91□□□□□ -1.46
HOXC12P31275 AC069154.1-201ENST00000432914 542 ntBASIC5.91□□□□□ -1.46
HOXC12P31275 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.91□□□□□ -1.46
HOXC12P31275 MTND1P28-201ENST00000435623 950 ntBASIC5.91□□□□□ -1.46
HOXC12P31275 AL031663.1-201ENST00000437445 219 ntBASIC5.91□□□□□ -1.46
HOXC12P31275 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HOXC12P31275 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.91□□□□□ -1.46
HOXC12P31275 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC5.91□□□□□ -1.46
HOXC12P31275 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
HOXC12P31275 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXC12P31275 GAPDHP37-201ENST00000442317 968 ntBASIC5.91□□□□□ -1.46
HOXC12P31275 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC5.91□□□□□ -1.46
HOXC12P31275 RPS27AP15-201ENST00000447672 466 ntBASIC5.91□□□□□ -1.46
HOXC12P31275 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.91□□□□□ -1.46
HOXC12P31275 AC097359.1-201ENST00000447946 463 ntBASIC5.91□□□□□ -1.46
HOXC12P31275 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.91□□□□□ -1.46
HOXC12P31275 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
HOXC12P31275 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
HOXC12P31275 RPS27P20-201ENST00000492051 246 ntBASIC5.91□□□□□ -1.46
HOXC12P31275 AC108078.3-201ENST00000502633 489 ntBASIC5.91□□□□□ -1.46
HOXC12P31275 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HOXC12P31275 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC5.91□□□□□ -1.46
HOXC12P31275 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXC12P31275 AL390198.2-201ENST00000510553 222 ntBASIC5.91□□□□□ -1.46
HOXC12P31275 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.91□□□□□ -1.46
HOXC12P31275 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.91□□□□□ -1.46
HOXC12P31275 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC5.91□□□□□ -1.46
HOXC12P31275 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXC12P31275 AP000859.1-201ENST00000525536 307 ntBASIC5.91□□□□□ -1.46
HOXC12P31275 AC239860.2-201ENST00000525886 270 ntBASIC5.91□□□□□ -1.46
HOXC12P31275 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
HOXC12P31275 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.91□□□□□ -1.46
HOXC12P31275 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXC12P31275 ANP32BP1-202ENST00000568553 737 ntBASIC5.91□□□□□ -1.46
HOXC12P31275 OR1E3-201ENST00000575608 948 ntBASIC5.91□□□□□ -1.46
HOXC12P31275 SNORA70D-201ENST00000578836 135 ntBASIC5.91□□□□□ -1.46
HOXC12P31275 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXC12P31275 AC012065.4-201ENST00000602445 679 ntBASIC5.91□□□□□ -1.46
HOXC12P31275 HNRNPA3P9-201ENST00000604913 979 ntBASIC5.91□□□□□ -1.46
HOXC12P31275 AL513477.2-201ENST00000607858 568 ntBASIC5.91□□□□□ -1.46
HOXC12P31275 AC107214.2-201ENST00000608204 634 ntBASIC5.91□□□□□ -1.46
HOXC12P31275 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.91□□□□□ -1.46
HOXC12P31275 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.91□□□□□ -1.46
HOXC12P31275 U6.42-201ENST00000618440 107 ntBASIC5.91□□□□□ -1.46
HOXC12P31275 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.91□□□□□ -1.46
HOXC12P31275 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXC12P31275 AC095031.1-201ENST00000623685 672 ntBASIC5.91□□□□□ -1.46
HOXC12P31275 TSHZ2-205ENST00000626626 670 ntBASIC5.91□□□□□ -1.46
HOXC12P31275 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXC12P31275 AC027559.1-201ENST00000636288 271 ntBASIC5.91□□□□□ -1.46
HOXC12P31275 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXC12P31275 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HOXC12P31275 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
HOXC12P31275 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXC12P31275 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXC12P31275 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXC12P31275 AL591135.1-201ENST00000401578 5914 ntBASIC5.91□□□□□ -1.46
HOXC12P31275 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HOXC12P31275 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC5.91□□□□□ -1.46
HOXC12P31275 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
HOXC12P31275 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.91□□□□□ -1.46
HOXC12P31275 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC5.91□□□□□ -1.46
HOXC12P31275 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
HOXC12P31275 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
HOXC12P31275 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXC12P31275 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.91□□□□□ -1.46
HOXC12P31275 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HOXC12P31275 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.9□□□□□ -1.46
HOXC12P31275 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.9□□□□□ -1.46
HOXC12P31275 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HOXC12P31275 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
HOXC12P31275 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
HOXC12P31275 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
HOXC12P31275 VPS35P1-201ENST00000563400 1518 ntBASIC5.9□□□□□ -1.46
HOXC12P31275 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.9□□□□□ -1.46
HOXC12P31275 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
HOXC12P31275 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HOXC12P31275 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
HOXC12P31275 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HOXC12P31275 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
HOXC12P31275 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
HOXC12P31275 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
HOXC12P31275 OR6C69P-201ENST00000394268 893 ntBASIC5.9□□□□□ -1.46
HOXC12P31275 RPL23AP29-201ENST00000397284 453 ntBASIC5.9□□□□□ -1.46
HOXC12P31275 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
HOXC12P31275 HMGB3P7-201ENST00000400214 611 ntBASIC5.9□□□□□ -1.46
HOXC12P31275 ZNF603P-201ENST00000405613 487 ntBASIC5.9□□□□□ -1.46
HOXC12P31275 RN7SKP296-201ENST00000411185 341 ntBASIC5.9□□□□□ -1.46
HOXC12P31275 AL136133.1-201ENST00000413694 376 ntBASIC5.9□□□□□ -1.46
HOXC12P31275 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HOXC12P31275 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.9□□□□□ -1.46
HOXC12P31275 AC062016.2-201ENST00000420950 676 ntBASIC5.9□□□□□ -1.46
HOXC12P31275 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.9□□□□□ -1.46
HOXC12P31275 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HOXC12P31275 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms