Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CNGA1P29973 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CNGA1P29973 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CNGA1P29973 RNU6-225P-201ENST00000384613 103 ntBASIC6.45□□□□□ -1.38
CNGA1P29973 MIR550A3-201ENST00000390735 95 ntBASIC6.45□□□□□ -1.38
CNGA1P29973 AF228730.1-201ENST00000397972 663 ntBASIC6.45□□□□□ -1.38
CNGA1P29973 AL133270.1-201ENST00000402635 279 ntBASIC6.45□□□□□ -1.38
CNGA1P29973 NIPA2P1-201ENST00000426223 976 ntBASIC6.45□□□□□ -1.38
CNGA1P29973 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC6.45□□□□□ -1.38
CNGA1P29973 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC6.45□□□□□ -1.38
CNGA1P29973 AC002542.1-201ENST00000440683 193 ntBASIC6.45□□□□□ -1.38
CNGA1P29973 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
CNGA1P29973 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC6.45□□□□□ -1.38
CNGA1P29973 PTGES3P5-201ENST00000455109 434 ntBASIC6.45□□□□□ -1.38
CNGA1P29973 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.45□□□□□ -1.38
CNGA1P29973 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC6.45□□□□□ -1.38
CNGA1P29973 RN7SL570P-201ENST00000484405 292 ntBASIC6.45□□□□□ -1.38
CNGA1P29973 AC105233.1-201ENST00000498840 781 ntBASIC6.45□□□□□ -1.38
CNGA1P29973 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.45□□□□□ -1.38
CNGA1P29973 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.45□□□□□ -1.38
CNGA1P29973 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.45□□□□□ -1.38
CNGA1P29973 TOMM22P4-201ENST00000511318 336 ntBASIC6.45□□□□□ -1.38
CNGA1P29973 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.45□□□□□ -1.38
CNGA1P29973 AC108471.1-201ENST00000513977 287 ntBASIC6.45□□□□□ -1.38
CNGA1P29973 MIR2117-201ENST00000516780 80 ntBASIC6.45□□□□□ -1.38
CNGA1P29973 CDH12P4-201ENST00000517835 295 ntBASIC6.45□□□□□ -1.38
CNGA1P29973 CDH12P3-201ENST00000517935 295 ntBASIC6.45□□□□□ -1.38
CNGA1P29973 CDH12P1-201ENST00000518435 295 ntBASIC6.45□□□□□ -1.38
CNGA1P29973 AC018442.3-201ENST00000523025 183 ntBASIC6.45□□□□□ -1.38
CNGA1P29973 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.45□□□□□ -1.38
CNGA1P29973 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.45□□□□□ -1.38
CNGA1P29973 AC007346.2-201ENST00000564816 892 ntBASIC6.45□□□□□ -1.38
CNGA1P29973 AC023824.3-201ENST00000569003 562 ntBASIC6.45□□□□□ -1.38
CNGA1P29973 RN7SL708P-201ENST00000580952 299 ntBASIC6.45□□□□□ -1.38
CNGA1P29973 AL035411.2-201ENST00000604022 421 ntBASIC6.45□□□□□ -1.38
CNGA1P29973 AC010975.3-201ENST00000618727 978 ntBASIC6.45□□□□□ -1.38
CNGA1P29973 AP003497.2-201ENST00000624220 967 ntBASIC6.45□□□□□ -1.38
CNGA1P29973 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CNGA1P29973 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.45□□□□□ -1.38
CNGA1P29973 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CNGA1P29973 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.45□□□□□ -1.38
CNGA1P29973 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CNGA1P29973 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
CNGA1P29973 SUCLA2P2-201ENST00000417269 1309 ntBASIC6.45□□□□□ -1.38
CNGA1P29973 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
CNGA1P29973 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CNGA1P29973 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.44□□□□□ -1.38
CNGA1P29973 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CNGA1P29973 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CNGA1P29973 AC005224.3-201ENST00000584683 2140 ntBASIC6.44□□□□□ -1.38
CNGA1P29973 AC016745.2-201ENST00000608834 3443 ntBASIC6.44□□□□□ -1.38
CNGA1P29973 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CNGA1P29973 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.44□□□□□ -1.38
CNGA1P29973 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CNGA1P29973 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CNGA1P29973 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CNGA1P29973 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CNGA1P29973 RN7SKP74-201ENST00000362849 309 ntBASIC6.44□□□□□ -1.38
CNGA1P29973 RNU6-224P-201ENST00000384055 107 ntBASIC6.44□□□□□ -1.38
CNGA1P29973 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CNGA1P29973 AC092745.2-202ENST00000411880 369 ntBASIC6.44□□□□□ -1.38
CNGA1P29973 GTF2IP5-201ENST00000414608 731 ntBASIC6.44□□□□□ -1.38
CNGA1P29973 VPS26BP1-201ENST00000417155 755 ntBASIC6.44□□□□□ -1.38
CNGA1P29973 AC009506.2-201ENST00000420635 840 ntBASIC6.44□□□□□ -1.38
CNGA1P29973 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC6.44□□□□□ -1.38
CNGA1P29973 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.44□□□□□ -1.38
CNGA1P29973 CR769776.1-201ENST00000441254 787 ntBASIC6.44□□□□□ -1.38
CNGA1P29973 CEACAMP7-201ENST00000444105 496 ntBASIC6.44□□□□□ -1.38
CNGA1P29973 FAR2P1-206ENST00000449736 709 ntBASIC6.44□□□□□ -1.38
CNGA1P29973 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC6.44□□□□□ -1.38
CNGA1P29973 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.44□□□□□ -1.38
CNGA1P29973 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC6.44□□□□□ -1.38
CNGA1P29973 TRBV5-2-201ENST00000489095 273 ntBASIC6.44□□□□□ -1.38
CNGA1P29973 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC6.44□□□□□ -1.38
CNGA1P29973 MTND4LP2-201ENST00000502312 285 ntBASIC6.44□□□□□ -1.38
CNGA1P29973 NDUFB5P1-201ENST00000508134 564 ntBASIC6.44□□□□□ -1.38
CNGA1P29973 AC104108.1-201ENST00000509930 412 ntBASIC6.44□□□□□ -1.38
CNGA1P29973 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.44□□□□□ -1.38
CNGA1P29973 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.44□□□□□ -1.38
CNGA1P29973 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC6.44□□□□□ -1.38
CNGA1P29973 HIGD1AP5-201ENST00000529959 259 ntBASIC6.44□□□□□ -1.38
CNGA1P29973 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.44□□□□□ -1.38
CNGA1P29973 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC6.44□□□□□ -1.38
CNGA1P29973 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
CNGA1P29973 NPM1P47-201ENST00000560843 856 ntBASIC6.44□□□□□ -1.38
CNGA1P29973 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC6.44□□□□□ -1.38
CNGA1P29973 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CNGA1P29973 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.44□□□□□ -1.38
CNGA1P29973 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC6.44□□□□□ -1.38
CNGA1P29973 MIR4675-201ENST00000577898 77 ntBASIC6.44□□□□□ -1.38
CNGA1P29973 MIR3691-201ENST00000578066 90 ntBASIC6.44□□□□□ -1.38
CNGA1P29973 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC6.44□□□□□ -1.38
CNGA1P29973 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC6.44□□□□□ -1.38
CNGA1P29973 Z99289.3-201ENST00000605586 594 ntBASIC6.44□□□□□ -1.38
CNGA1P29973 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC6.44□□□□□ -1.38
CNGA1P29973 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.44□□□□□ -1.38
CNGA1P29973 MIR7973-1-201ENST00000614683 76 ntBASIC6.44□□□□□ -1.38
CNGA1P29973 AC090607.5-201ENST00000615692 224 ntBASIC6.44□□□□□ -1.38
CNGA1P29973 AC068870.2-201ENST00000620635 389 ntBASIC6.44□□□□□ -1.38
CNGA1P29973 AP002505.2-201ENST00000623585 696 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms