Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
VARSP26640 AL136133.1-201ENST00000413694 376 ntBASIC7.29□□□□□ -1.24
VARSP26640 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC7.29□□□□□ -1.24
VARSP26640 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC7.29□□□□□ -1.24
VARSP26640 AC114482.1-201ENST00000418010 247 ntBASIC7.29□□□□□ -1.24
VARSP26640 FDPSP6-201ENST00000425091 512 ntBASIC7.29□□□□□ -1.24
VARSP26640 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC7.29□□□□□ -1.24
VARSP26640 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
VARSP26640 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC7.29□□□□□ -1.24
VARSP26640 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC7.29□□□□□ -1.24
VARSP26640 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC7.29□□□□□ -1.24
VARSP26640 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC7.29□□□□□ -1.24
VARSP26640 AL135752.1-201ENST00000479477 471 ntBASIC7.29□□□□□ -1.24
VARSP26640 RN7SL153P-201ENST00000486501 292 ntBASIC7.29□□□□□ -1.24
VARSP26640 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC7.29□□□□□ -1.24
VARSP26640 Vault.3-201ENST00000516676 95 ntBASIC7.29□□□□□ -1.24
VARSP26640 RN7SKP98-201ENST00000517070 156 ntBASIC7.29□□□□□ -1.24
VARSP26640 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC7.29□□□□□ -1.24
VARSP26640 HMGB1P23-201ENST00000518743 568 ntBASIC7.29□□□□□ -1.24
VARSP26640 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC7.29□□□□□ -1.24
VARSP26640 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC7.29□□□□□ -1.24
VARSP26640 TPM3P3-201ENST00000521343 354 ntBASIC7.29□□□□□ -1.24
VARSP26640 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC7.29□□□□□ -1.24
VARSP26640 AC022861.1-201ENST00000522981 663 ntBASIC7.29□□□□□ -1.24
VARSP26640 AP005597.2-201ENST00000526238 341 ntBASIC7.29□□□□□ -1.24
VARSP26640 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC7.29□□□□□ -1.24
VARSP26640 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC7.29□□□□□ -1.24
VARSP26640 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
VARSP26640 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC7.29□□□□□ -1.24
VARSP26640 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
VARSP26640 AC026464.5-201ENST00000562497 722 ntBASIC7.29□□□□□ -1.24
VARSP26640 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC7.29□□□□□ -1.24
VARSP26640 MIR3159-201ENST00000584572 74 ntBASIC7.29□□□□□ -1.24
VARSP26640 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC7.29□□□□□ -1.24
VARSP26640 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC7.29□□□□□ -1.24
VARSP26640 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
VARSP26640 AC005518.2-201ENST00000603254 282 ntBASIC7.29□□□□□ -1.24
VARSP26640 RNU6-87P-201ENST00000607561 108 ntBASIC7.29□□□□□ -1.24
VARSP26640 AP004247.3-201ENST00000608682 624 ntBASIC7.29□□□□□ -1.24
VARSP26640 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC7.29□□□□□ -1.24
VARSP26640 U4.1-201ENST00000620349 87 ntBASIC7.29□□□□□ -1.24
VARSP26640 AC073488.8-201ENST00000631952 757 ntBASIC7.29□□□□□ -1.24
VARSP26640 AC026108.1-201ENST00000635444 547 ntBASIC7.29□□□□□ -1.24
VARSP26640 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
VARSP26640 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
VARSP26640 AP003175.1-201ENST00000641383 6658 ntBASIC7.29□□□□□ -1.24
VARSP26640 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
VARSP26640 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
VARSP26640 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC7.29□□□□□ -1.24
VARSP26640 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC7.29□□□□□ -1.24
VARSP26640 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC7.29□□□□□ -1.24
VARSP26640 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
VARSP26640 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
VARSP26640 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
VARSP26640 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
VARSP26640 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
VARSP26640 LINC00561-201ENST00000565815 2738 ntBASIC7.29□□□□□ -1.24
VARSP26640 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
VARSP26640 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC7.28□□□□□ -1.24
VARSP26640 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC7.28□□□□□ -1.24
VARSP26640 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC7.28□□□□□ -1.24
VARSP26640 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
VARSP26640 AC112255.1-201ENST00000624070 2493 ntBASIC7.28□□□□□ -1.24
VARSP26640 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC7.28□□□□□ -1.24
VARSP26640 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
VARSP26640 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
VARSP26640 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
VARSP26640 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
VARSP26640 AC123769.2-201ENST00000624332 5984 ntBASIC7.28□□□□□ -1.24
VARSP26640 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
VARSP26640 INSL5-201ENST00000304526 715 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
VARSP26640 OR9K1P-201ENST00000326513 941 ntBASIC7.28□□□□□ -1.24
VARSP26640 RNU6-777P-201ENST00000364265 104 ntBASIC7.28□□□□□ -1.24
VARSP26640 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
VARSP26640 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
VARSP26640 Y_RNA.476-201ENST00000384347 108 ntBASIC7.28□□□□□ -1.24
VARSP26640 MIR498-201ENST00000385134 124 ntBASIC7.28□□□□□ -1.24
VARSP26640 MIR431-201ENST00000385266 114 ntBASIC7.28□□□□□ -1.24
VARSP26640 RPSAP44-201ENST00000406712 884 ntBASIC7.28□□□□□ -1.24
VARSP26640 MIR1303-201ENST00000408625 86 ntBASIC7.28□□□□□ -1.24
VARSP26640 RNU2-8P-201ENST00000410727 190 ntBASIC7.28□□□□□ -1.24
VARSP26640 RNU6-847P-201ENST00000411115 108 ntBASIC7.28□□□□□ -1.24
VARSP26640 CBX1P3-201ENST00000413296 527 ntBASIC7.28□□□□□ -1.24
VARSP26640 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC7.28□□□□□ -1.24
VARSP26640 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC7.28□□□□□ -1.24
VARSP26640 OR10T1P-201ENST00000424327 947 ntBASIC7.28□□□□□ -1.24
VARSP26640 KRTAP3-4P-201ENST00000430780 280 ntBASIC7.28□□□□□ -1.24
VARSP26640 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC7.28□□□□□ -1.24
VARSP26640 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC7.28□□□□□ -1.24
VARSP26640 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC7.28□□□□□ -1.24
VARSP26640 AL353803.3-201ENST00000444641 335 ntBASIC7.28□□□□□ -1.24
VARSP26640 RPL31P44-201ENST00000447680 377 ntBASIC7.28□□□□□ -1.24
VARSP26640 MTCO1P27-201ENST00000448269 226 ntBASIC7.28□□□□□ -1.24
VARSP26640 MEMO1P4-201ENST00000453590 386 ntBASIC7.28□□□□□ -1.24
VARSP26640 TCEAL4P1-201ENST00000453620 588 ntBASIC7.28□□□□□ -1.24
VARSP26640 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC7.28□□□□□ -1.24
VARSP26640 HMGN2P26-201ENST00000463169 339 ntBASIC7.28□□□□□ -1.24
VARSP26640 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC7.28□□□□□ -1.24
VARSP26640 RN7SL308P-201ENST00000464971 297 ntBASIC7.28□□□□□ -1.24
VARSP26640 PGAM4P2-201ENST00000512491 721 ntBASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms