Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC5.93□□□□□ -1.46
POLR2AP24928 Y_RNA.318-201ENST00000365131 97 ntBASIC5.93□□□□□ -1.46
POLR2AP24928 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
POLR2AP24928 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
POLR2AP24928 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.93□□□□□ -1.46
POLR2AP24928 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.93□□□□□ -1.46
POLR2AP24928 CDC27P1-201ENST00000445384 715 ntBASIC5.93□□□□□ -1.46
POLR2AP24928 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.93□□□□□ -1.46
POLR2AP24928 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC5.93□□□□□ -1.46
POLR2AP24928 RPL7P32-201ENST00000457119 744 ntBASIC5.93□□□□□ -1.46
POLR2AP24928 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.93□□□□□ -1.46
POLR2AP24928 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.93□□□□□ -1.46
POLR2AP24928 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.93□□□□□ -1.46
POLR2AP24928 AC097173.1-201ENST00000505862 819 ntBASIC5.93□□□□□ -1.46
POLR2AP24928 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.93□□□□□ -1.46
POLR2AP24928 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC5.93□□□□□ -1.46
POLR2AP24928 OR7E10P-201ENST00000526420 991 ntBASIC5.93□□□□□ -1.46
POLR2AP24928 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.93□□□□□ -1.46
POLR2AP24928 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
POLR2AP24928 MIR3939-201ENST00000582614 106 ntBASIC5.93□□□□□ -1.46
POLR2AP24928 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.93□□□□□ -1.46
POLR2AP24928 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.93□□□□□ -1.46
POLR2AP24928 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.93□□□□□ -1.46
POLR2AP24928 AC125494.2-201ENST00000602431 657 ntBASIC5.93□□□□□ -1.46
POLR2AP24928 AC005191.1-201ENST00000603950 358 ntBASIC5.93□□□□□ -1.46
POLR2AP24928 AC011626.1-201ENST00000604710 562 ntBASIC5.93□□□□□ -1.46
POLR2AP24928 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.93□□□□□ -1.46
POLR2AP24928 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.93□□□□□ -1.46
POLR2AP24928 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.92□□□□□ -1.46
POLR2AP24928 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.92□□□□□ -1.46
POLR2AP24928 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
POLR2AP24928 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.92□□□□□ -1.46
POLR2AP24928 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
POLR2AP24928 AC079298.1-201ENST00000625026 1619 ntBASIC5.92□□□□□ -1.46
POLR2AP24928 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
POLR2AP24928 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.92□□□□□ -1.46
POLR2AP24928 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.92□□□□□ -1.46
POLR2AP24928 RNU6-609P-201ENST00000365459 107 ntBASIC5.92□□□□□ -1.46
POLR2AP24928 RNU6-152P-201ENST00000384037 107 ntBASIC5.92□□□□□ -1.46
POLR2AP24928 ATG4AP1-201ENST00000416893 538 ntBASIC5.92□□□□□ -1.46
POLR2AP24928 ZNF965P-201ENST00000432501 817 ntBASIC5.92□□□□□ -1.46
POLR2AP24928 MTCO3P5-201ENST00000433620 714 ntBASIC5.92□□□□□ -1.46
POLR2AP24928 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.92□□□□□ -1.46
POLR2AP24928 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.92□□□□□ -1.46
POLR2AP24928 AURKAPS2-201ENST00000454983 333 ntBASIC5.92□□□□□ -1.46
POLR2AP24928 HMGB1P4-201ENST00000455362 567 ntBASIC5.92□□□□□ -1.46
POLR2AP24928 RPS17P2-201ENST00000461663 408 ntBASIC5.92□□□□□ -1.46
POLR2AP24928 CABYRP1-201ENST00000465493 1045 ntBASIC5.92□□□□□ -1.46
POLR2AP24928 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC5.92□□□□□ -1.46
POLR2AP24928 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.92□□□□□ -1.46
POLR2AP24928 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.92□□□□□ -1.46
POLR2AP24928 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.92□□□□□ -1.46
POLR2AP24928 VN1R85P-201ENST00000601587 426 ntBASIC5.92□□□□□ -1.46
POLR2AP24928 AL445423.1-201ENST00000609941 536 ntBASIC5.92□□□□□ -1.46
POLR2AP24928 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.92□□□□□ -1.46
POLR2AP24928 AC005962.2-201ENST00000611427 652 ntBASIC5.92□□□□□ -1.46
POLR2AP24928 AC008121.2-201ENST00000614647 523 ntBASIC5.92□□□□□ -1.46
POLR2AP24928 AC025016.1-201ENST00000616746 682 ntBASIC5.92□□□□□ -1.46
POLR2AP24928 AC078883.4-201ENST00000623218 367 ntBASIC5.92□□□□□ -1.46
POLR2AP24928 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
POLR2AP24928 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
POLR2AP24928 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
POLR2AP24928 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
POLR2AP24928 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
POLR2AP24928 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.92□□□□□ -1.46
POLR2AP24928 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
POLR2AP24928 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
POLR2AP24928 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.91□□□□□ -1.46
POLR2AP24928 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.91□□□□□ -1.46
POLR2AP24928 RNA5SP447-201ENST00000363749 119 ntBASIC5.91□□□□□ -1.46
POLR2AP24928 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.91□□□□□ -1.46
POLR2AP24928 AC119751.3-201ENST00000399720 670 ntBASIC5.91□□□□□ -1.46
POLR2AP24928 BX510359.2-201ENST00000417920 305 ntBASIC5.91□□□□□ -1.46
POLR2AP24928 MTCO3P4-201ENST00000419236 787 ntBASIC5.91□□□□□ -1.46
POLR2AP24928 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.91□□□□□ -1.46
POLR2AP24928 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.91□□□□□ -1.46
POLR2AP24928 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
POLR2AP24928 AL009048.1-201ENST00000450437 298 ntBASIC5.91□□□□□ -1.46
POLR2AP24928 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.91□□□□□ -1.46
POLR2AP24928 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC5.91□□□□□ -1.46
POLR2AP24928 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC5.91□□□□□ -1.46
POLR2AP24928 AC010486.2-201ENST00000505572 483 ntBASIC5.91□□□□□ -1.46
POLR2AP24928 AC010468.3-201ENST00000508225 458 ntBASIC5.91□□□□□ -1.46
POLR2AP24928 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.91□□□□□ -1.46
POLR2AP24928 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.91□□□□□ -1.46
POLR2AP24928 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.91□□□□□ -1.46
POLR2AP24928 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.91□□□□□ -1.46
POLR2AP24928 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.91□□□□□ -1.46
POLR2AP24928 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC5.91□□□□□ -1.46
POLR2AP24928 MIR3138-201ENST00000585238 82 ntBASIC5.91□□□□□ -1.46
POLR2AP24928 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.91□□□□□ -1.46
POLR2AP24928 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC5.91□□□□□ -1.46
POLR2AP24928 AC113368.1-201ENST00000603736 382 ntBASIC5.91□□□□□ -1.46
POLR2AP24928 CYCSP41-201ENST00000616920 296 ntBASIC5.91□□□□□ -1.46
POLR2AP24928 AC021106.3-201ENST00000623925 531 ntBASIC5.91□□□□□ -1.46
POLR2AP24928 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.91□□□□□ -1.46
POLR2AP24928 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
POLR2AP24928 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
POLR2AP24928 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC5.91□□□□□ -1.46
POLR2AP24928 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms