Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.25□□□□□ -1.73
USF1P22415 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
USF1P22415 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
USF1P22415 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.25□□□□□ -1.73
USF1P22415 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.25□□□□□ -1.73
USF1P22415 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
USF1P22415 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
USF1P22415 AC017079.1-201ENST00000333650 415 ntBASIC4.25□□□□□ -1.73
USF1P22415 RNVU1-6-201ENST00000364688 164 ntBASIC4.25□□□□□ -1.73
USF1P22415 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
USF1P22415 HMGB3P7-201ENST00000400214 611 ntBASIC4.25□□□□□ -1.73
USF1P22415 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.25□□□□□ -1.73
USF1P22415 RPS16P5-201ENST00000406501 404 ntBASIC4.25□□□□□ -1.73
USF1P22415 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.25□□□□□ -1.73
USF1P22415 RPL12P9-201ENST00000412942 488 ntBASIC4.25□□□□□ -1.73
USF1P22415 UBE2V2P1-201ENST00000434717 398 ntBASIC4.25□□□□□ -1.73
USF1P22415 BTG3P1-201ENST00000435859 716 ntBASIC4.25□□□□□ -1.73
USF1P22415 RHOT1P3-201ENST00000436571 331 ntBASIC4.25□□□□□ -1.73
USF1P22415 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.25□□□□□ -1.73
USF1P22415 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.25□□□□□ -1.73
USF1P22415 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.25□□□□□ -1.73
USF1P22415 RNA5SP103-201ENST00000459503 118 ntBASIC4.25□□□□□ -1.73
USF1P22415 RN7SL443P-201ENST00000464331 290 ntBASIC4.25□□□□□ -1.73
USF1P22415 RPL21P6-201ENST00000479171 504 ntBASIC4.25□□□□□ -1.73
USF1P22415 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.25□□□□□ -1.73
USF1P22415 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.25□□□□□ -1.73
USF1P22415 RPS27AP18-201ENST00000515536 459 ntBASIC4.25□□□□□ -1.73
USF1P22415 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.25□□□□□ -1.73
USF1P22415 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.25□□□□□ -1.73
USF1P22415 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.25□□□□□ -1.73
USF1P22415 UBE2FP2-201ENST00000566646 462 ntBASIC4.25□□□□□ -1.73
USF1P22415 AC105254.2-201ENST00000603636 436 ntBASIC4.25□□□□□ -1.73
USF1P22415 AL121890.2-201ENST00000617644 465 ntBASIC4.25□□□□□ -1.73
USF1P22415 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
USF1P22415 MIR6810-201ENST00000622701 70 ntBASIC4.25□□□□□ -1.73
USF1P22415 MTCO1P1-201ENST00000624263 1081 ntBASIC4.25□□□□□ -1.73
USF1P22415 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
USF1P22415 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
USF1P22415 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
USF1P22415 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.25□□□□□ -1.73
USF1P22415 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
USF1P22415 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
USF1P22415 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
USF1P22415 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
USF1P22415 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.25□□□□□ -1.73
USF1P22415 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
USF1P22415 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.24□□□□□ -1.73
USF1P22415 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
USF1P22415 ZNF652P1-201ENST00000442420 1309 ntBASIC4.24□□□□□ -1.73
USF1P22415 AC093775.1-201ENST00000624154 1868 ntBASIC4.24□□□□□ -1.73
USF1P22415 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
USF1P22415 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.24□□□□□ -1.73
USF1P22415 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
USF1P22415 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
USF1P22415 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.24□□□□□ -1.73
USF1P22415 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
USF1P22415 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
USF1P22415 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.24□□□□□ -1.73
USF1P22415 MIR589-201ENST00000385238 99 ntBASIC4.24□□□□□ -1.73
USF1P22415 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
USF1P22415 AC104297.1-201ENST00000393779 870 ntBASIC4.24□□□□□ -1.73
USF1P22415 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
USF1P22415 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.24□□□□□ -1.73
USF1P22415 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.24□□□□□ -1.73
USF1P22415 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.24□□□□□ -1.73
USF1P22415 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.24□□□□□ -1.73
USF1P22415 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.24□□□□□ -1.73
USF1P22415 AC046176.1-201ENST00000435260 1170 ntBASIC4.24□□□□□ -1.73
USF1P22415 OR7E125P-201ENST00000443450 846 ntBASIC4.24□□□□□ -1.73
USF1P22415 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.24□□□□□ -1.73
USF1P22415 AL354714.3-201ENST00000447284 493 ntBASIC4.24□□□□□ -1.73
USF1P22415 OR52J1P-201ENST00000450596 932 ntBASIC4.24□□□□□ -1.73
USF1P22415 BX842559.2-201ENST00000451418 605 ntBASIC4.24□□□□□ -1.73
USF1P22415 NDUFA12P1-201ENST00000455914 406 ntBASIC4.24□□□□□ -1.73
USF1P22415 HSPE1P22-201ENST00000456856 327 ntBASIC4.24□□□□□ -1.73
USF1P22415 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.24□□□□□ -1.73
USF1P22415 TPT1P1-201ENST00000458495 518 ntBASIC4.24□□□□□ -1.73
USF1P22415 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.24□□□□□ -1.73
USF1P22415 AC063943.1-201ENST00000465434 453 ntBASIC4.24□□□□□ -1.73
USF1P22415 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.24□□□□□ -1.73
USF1P22415 AC008897.1-201ENST00000494006 347 ntBASIC4.24□□□□□ -1.73
USF1P22415 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
USF1P22415 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.24□□□□□ -1.73
USF1P22415 OR7H2P-201ENST00000513483 306 ntBASIC4.24□□□□□ -1.73
USF1P22415 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.24□□□□□ -1.73
USF1P22415 RNA5SP43-201ENST00000516559 110 ntBASIC4.24□□□□□ -1.73
USF1P22415 AC100784.1-201ENST00000522790 310 ntBASIC4.24□□□□□ -1.73
USF1P22415 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.24□□□□□ -1.73
USF1P22415 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.24□□□□□ -1.73
USF1P22415 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.24□□□□□ -1.73
USF1P22415 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.24□□□□□ -1.73
USF1P22415 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.24□□□□□ -1.73
USF1P22415 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.24□□□□□ -1.73
USF1P22415 MTND2P13-201ENST00000577438 1039 ntBASIC4.24□□□□□ -1.73
USF1P22415 AC022884.2-201ENST00000578535 580 ntBASIC4.24□□□□□ -1.73
USF1P22415 MIR3667-201ENST00000581025 74 ntBASIC4.24□□□□□ -1.73
USF1P22415 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.24□□□□□ -1.73
USF1P22415 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
USF1P22415 AP001521.2-201ENST00000608772 546 ntBASIC4.24□□□□□ -1.73
USF1P22415 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms