Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC8.15□□□□□ -1.11
CSB-PGBD3P0DP91 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
CSB-PGBD3P0DP91 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 AC073429.2-201ENST00000569694 1444 ntBASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 RNA5SP375-201ENST00000362975 119 ntBASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 U3.4-201ENST00000363352 213 ntBASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 RNU6-666P-201ENST00000363499 107 ntBASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 RNU6-532P-201ENST00000384318 107 ntBASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 RNU6-185P-201ENST00000384421 107 ntBASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 RNU6-1263P-201ENST00000384601 106 ntBASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 RNU6-114P-201ENST00000384704 105 ntBASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 SNRPEP6-201ENST00000407465 277 ntBASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 AC104651.1-201ENST00000427559 735 ntBASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 RPL23AP4-201ENST00000427757 463 ntBASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 CNOT7P1-201ENST00000429006 852 ntBASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 CFTRP1-201ENST00000456646 183 ntBASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 RN7SL269P-201ENST00000467795 305 ntBASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 AC006539.1-201ENST00000481419 501 ntBASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 KCTD9P4-201ENST00000526766 1166 ntBASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 MIR3912-201ENST00000577566 105 ntBASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 MIR1273E-201ENST00000581165 102 ntBASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 AC004890.3-201ENST00000605566 1095 ntBASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 RPL12P48-201ENST00000605620 304 ntBASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 AL021368.3-201ENST00000607119 578 ntBASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 AC006566.1-201ENST00000608943 513 ntBASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 AL445647.2-201ENST00000615170 130 ntBASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 AC087821.2-201ENST00000637086 450 ntBASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 AC123769.1-201ENST00000530992 3192 ntBASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 OR52B5P-204ENST00000641744 3467 ntBASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 GNL2P1-201ENST00000451274 2190 ntBASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 MT-RNR2-201ENST00000387347 1559 ntBASIC8.14□□□□□ -1.11
CSB-PGBD3P0DP91 AC093297.3-201ENST00000607056 2517 ntBASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 AC105114.1-201ENST00000624795 1862 ntBASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 RNA5SP350-201ENST00000363298 111 ntBASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 MIR525-201ENST00000384978 85 ntBASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 GAS5-202ENST00000414075 413 ntTSL 2 BASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 ARL6IP1P2-201ENST00000431356 563 ntBASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 DEFA9P-201ENST00000433042 285 ntBASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 FTH1P16-201ENST00000435241 552 ntBASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 ARL5AP2-201ENST00000444698 533 ntBASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 AL512593.1-201ENST00000444758 779 ntBASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 AC002486.2-201ENST00000447806 590 ntBASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 GEMIN2P1-201ENST00000454246 752 ntBASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 RANP1-206ENST00000455094 651 ntBASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 RNU6-405P-201ENST00000516637 110 ntBASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 OR5D2P-201ENST00000524390 911 ntBASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 AC084337.1-201ENST00000524809 686 ntBASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 AP001646.1-201ENST00000527936 915 ntBASIC8.13□□□□□ -1.11
CSB-PGBD3P0DP91 AC104383.1-201ENST00000530297 370 ntBASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms