Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 TVP23CP2-201ENST00000571473 623 ntBASIC3.62□□□□□ -1.83
CXCL1P09341 MIR4271-201ENST00000582451 67 ntBASIC3.62□□□□□ -1.83
CXCL1P09341 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.62□□□□□ -1.83
CXCL1P09341 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC3.62□□□□□ -1.83
CXCL1P09341 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC3.62□□□□□ -1.83
CXCL1P09341 AC078899.5-201ENST00000612475 178 ntBASIC3.62□□□□□ -1.83
CXCL1P09341 AL138721.1-201ENST00000616756 179 ntBASIC3.62□□□□□ -1.83
CXCL1P09341 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC3.62□□□□□ -1.83
CXCL1P09341 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CXCL1P09341 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.62□□□□□ -1.83
CXCL1P09341 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CXCL1P09341 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.62□□□□□ -1.83
CXCL1P09341 SMG1P6-201ENST00000532337 2930 ntBASIC3.62□□□□□ -1.83
CXCL1P09341 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CXCL1P09341 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CXCL1P09341 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.62□□□□□ -1.83
CXCL1P09341 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.61□□□□□ -1.83
CXCL1P09341 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CXCL1P09341 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CXCL1P09341 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.61□□□□□ -1.83
CXCL1P09341 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.61□□□□□ -1.83
CXCL1P09341 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.61□□□□□ -1.83
CXCL1P09341 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CXCL1P09341 ZNF962P-201ENST00000443465 3140 ntBASIC3.61□□□□□ -1.83
CXCL1P09341 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CXCL1P09341 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CXCL1P09341 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CXCL1P09341 RNA5SP151-201ENST00000365632 117 ntBASIC3.61□□□□□ -1.83
CXCL1P09341 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC3.61□□□□□ -1.83
CXCL1P09341 RNA5SP306-201ENST00000411087 107 ntBASIC3.61□□□□□ -1.83
CXCL1P09341 AC013268.2-201ENST00000420753 337 ntBASIC3.61□□□□□ -1.83
CXCL1P09341 CENPIP1-201ENST00000425713 902 ntBASIC3.61□□□□□ -1.83
CXCL1P09341 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.61□□□□□ -1.83
CXCL1P09341 RPL21P91-201ENST00000429231 479 ntBASIC3.61□□□□□ -1.83
CXCL1P09341 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC3.61□□□□□ -1.83
CXCL1P09341 CYCSP6-201ENST00000434498 302 ntBASIC3.61□□□□□ -1.83
CXCL1P09341 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC3.61□□□□□ -1.83
CXCL1P09341 CYCSP12-201ENST00000437729 300 ntBASIC3.61□□□□□ -1.83
CXCL1P09341 MTND6P18-201ENST00000439477 513 ntBASIC3.61□□□□□ -1.83
CXCL1P09341 DNAJA1P5-201ENST00000440278 943 ntBASIC3.61□□□□□ -1.83
CXCL1P09341 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.61□□□□□ -1.83
CXCL1P09341 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.61□□□□□ -1.83
CXCL1P09341 AC007386.1-201ENST00000455212 582 ntBASIC3.61□□□□□ -1.83
CXCL1P09341 AC079804.1-201ENST00000461922 436 ntBASIC3.61□□□□□ -1.83
CXCL1P09341 RPL35AP19-201ENST00000469425 329 ntBASIC3.61□□□□□ -1.83
CXCL1P09341 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC3.61□□□□□ -1.83
CXCL1P09341 AC146944.2-203ENST00000502493 354 ntBASIC3.61□□□□□ -1.83
CXCL1P09341 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC3.61□□□□□ -1.83
CXCL1P09341 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.61□□□□□ -1.83
CXCL1P09341 AC139495.1-202ENST00000513164 354 ntBASIC3.61□□□□□ -1.83
CXCL1P09341 RNU6-709P-201ENST00000517257 104 ntBASIC3.61□□□□□ -1.83
CXCL1P09341 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.61□□□□□ -1.83
CXCL1P09341 KCTD9P6-201ENST00000522306 950 ntBASIC3.61□□□□□ -1.83
CXCL1P09341 IGKV2-4-201ENST00000523070 340 ntBASIC3.61□□□□□ -1.83
CXCL1P09341 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC3.61□□□□□ -1.83
CXCL1P09341 ASB8-215ENST00000540782 659 ntTSL 3 BASIC3.61□□□□□ -1.83
CXCL1P09341 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CXCL1P09341 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
CXCL1P09341 DUX4L52-201ENST00000549363 777 ntBASIC3.61□□□□□ -1.83
CXCL1P09341 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.61□□□□□ -1.83
CXCL1P09341 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC3.61□□□□□ -1.83
CXCL1P09341 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CXCL1P09341 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC3.61□□□□□ -1.83
CXCL1P09341 NMNAT1P1-201ENST00000554095 876 ntBASIC3.61□□□□□ -1.83
CXCL1P09341 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC3.61□□□□□ -1.83
CXCL1P09341 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CXCL1P09341 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC3.61□□□□□ -1.83
CXCL1P09341 SNORA74C-1-201ENST00000580726 201 ntBASIC3.61□□□□□ -1.83
CXCL1P09341 MRO-208ENST00000588444 866 ntTSL 3 BASIC3.61□□□□□ -1.83
CXCL1P09341 AC020914.4-201ENST00000597690 277 ntBASIC3.61□□□□□ -1.83
CXCL1P09341 AC025946.2-201ENST00000603398 234 ntBASIC3.61□□□□□ -1.83
CXCL1P09341 AC243960.7-201ENST00000623532 707 ntBASIC3.61□□□□□ -1.83
CXCL1P09341 AP003499.2-201ENST00000624100 483 ntBASIC3.61□□□□□ -1.83
CXCL1P09341 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC3.61□□□□□ -1.83
CXCL1P09341 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC3.61□□□□□ -1.83
CXCL1P09341 AL121950.1-201ENST00000624993 2077 ntBASIC3.61□□□□□ -1.83
CXCL1P09341 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CXCL1P09341 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.6□□□□□ -1.83
CXCL1P09341 ZFRP1-201ENST00000457579 2970 ntBASIC3.6□□□□□ -1.83
CXCL1P09341 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CXCL1P09341 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CXCL1P09341 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC3.6□□□□□ -1.83
CXCL1P09341 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CXCL1P09341 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CXCL1P09341 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CXCL1P09341 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CXCL1P09341 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CXCL1P09341 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
CXCL1P09341 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CXCL1P09341 RNU1-15P-201ENST00000353977 144 ntBASIC3.6□□□□□ -1.83
CXCL1P09341 RNA5SP183-201ENST00000362452 119 ntBASIC3.6□□□□□ -1.83
CXCL1P09341 SNORA17.1-201ENST00000362945 126 ntBASIC3.6□□□□□ -1.83
CXCL1P09341 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.6□□□□□ -1.83
CXCL1P09341 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CXCL1P09341 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC3.6□□□□□ -1.83
CXCL1P09341 JKAMPP1-201ENST00000413804 919 ntBASIC3.6□□□□□ -1.83
CXCL1P09341 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC3.6□□□□□ -1.83
CXCL1P09341 AC073335.1-201ENST00000427776 363 ntBASIC3.6□□□□□ -1.83
CXCL1P09341 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CXCL1P09341 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms