Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 PROS2P-201ENST00000474651 1951 ntBASIC4.26□□□□□ -1.73
HLA-DPB1P04440 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
HLA-DPB1P04440 RNU1-108P-201ENST00000362556 161 ntBASIC4.26□□□□□ -1.73
HLA-DPB1P04440 RNA5SP28-201ENST00000363841 119 ntBASIC4.26□□□□□ -1.73
HLA-DPB1P04440 RNA5SP428-201ENST00000365129 132 ntBASIC4.26□□□□□ -1.73
HLA-DPB1P04440 SPTLC1P2-201ENST00000407089 121 ntBASIC4.26□□□□□ -1.73
HLA-DPB1P04440 RN7SKP213-201ENST00000410746 298 ntBASIC4.26□□□□□ -1.73
HLA-DPB1P04440 MTND4LP21-201ENST00000415303 295 ntBASIC4.26□□□□□ -1.73
HLA-DPB1P04440 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.26□□□□□ -1.73
HLA-DPB1P04440 EIF4EP1-201ENST00000422311 642 ntBASIC4.26□□□□□ -1.73
HLA-DPB1P04440 GTF2IP2-201ENST00000424290 697 ntBASIC4.26□□□□□ -1.73
HLA-DPB1P04440 NPM1P22-201ENST00000427761 952 ntBASIC4.26□□□□□ -1.73
HLA-DPB1P04440 AL627308.1-201ENST00000435693 821 ntBASIC4.26□□□□□ -1.73
HLA-DPB1P04440 OR7E125P-201ENST00000443450 846 ntBASIC4.26□□□□□ -1.73
HLA-DPB1P04440 AL137845.2-201ENST00000444292 988 ntBASIC4.26□□□□□ -1.73
HLA-DPB1P04440 OR52Y1P-201ENST00000452418 828 ntBASIC4.26□□□□□ -1.73
HLA-DPB1P04440 RN7SL515P-201ENST00000463999 297 ntBASIC4.26□□□□□ -1.73
HLA-DPB1P04440 RN7SL214P-201ENST00000487317 265 ntBASIC4.26□□□□□ -1.73
HLA-DPB1P04440 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
HLA-DPB1P04440 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.26□□□□□ -1.73
HLA-DPB1P04440 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.26□□□□□ -1.73
HLA-DPB1P04440 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.26□□□□□ -1.73
HLA-DPB1P04440 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.26□□□□□ -1.73
HLA-DPB1P04440 AC022882.1-201ENST00000532142 501 ntBASIC4.26□□□□□ -1.73
HLA-DPB1P04440 HMGN2P6-201ENST00000551091 273 ntBASIC4.26□□□□□ -1.73
HLA-DPB1P04440 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.26□□□□□ -1.73
HLA-DPB1P04440 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.26□□□□□ -1.73
HLA-DPB1P04440 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.26□□□□□ -1.73
HLA-DPB1P04440 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.26□□□□□ -1.73
HLA-DPB1P04440 HMGB2P1-201ENST00000591146 634 ntBASIC4.26□□□□□ -1.73
HLA-DPB1P04440 AC010615.3-201ENST00000597319 394 ntBASIC4.26□□□□□ -1.73
HLA-DPB1P04440 VN1R81P-201ENST00000602085 372 ntBASIC4.26□□□□□ -1.73
HLA-DPB1P04440 AC087763.1-201ENST00000603391 286 ntBASIC4.26□□□□□ -1.73
HLA-DPB1P04440 SNORA35B-201ENST00000607417 129 ntBASIC4.26□□□□□ -1.73
HLA-DPB1P04440 EIF3FP1-201ENST00000613970 806 ntBASIC4.26□□□□□ -1.73
HLA-DPB1P04440 AP002799.1-201ENST00000623552 423 ntBASIC4.26□□□□□ -1.73
HLA-DPB1P04440 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DPB1P04440 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.26□□□□□ -1.73
HLA-DPB1P04440 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
HLA-DPB1P04440 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.26□□□□□ -1.73
HLA-DPB1P04440 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.26□□□□□ -1.73
HLA-DPB1P04440 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DPB1P04440 AC000123.3-201ENST00000624029 4975 ntBASIC4.26□□□□□ -1.73
HLA-DPB1P04440 CUL4AP1-201ENST00000514750 1863 ntBASIC4.26□□□□□ -1.73
HLA-DPB1P04440 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DPB1P04440 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DPB1P04440 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.26□□□□□ -1.73
HLA-DPB1P04440 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DPB1P04440 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DPB1P04440 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.26□□□□□ -1.73
HLA-DPB1P04440 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.26□□□□□ -1.73
HLA-DPB1P04440 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DPB1P04440 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.25□□□□□ -1.73
HLA-DPB1P04440 AC007342.5-201ENST00000571340 2142 ntBASIC4.25□□□□□ -1.73
HLA-DPB1P04440 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DPB1P04440 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
HLA-DPB1P04440 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DPB1P04440 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
HLA-DPB1P04440 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
HLA-DPB1P04440 HSPA8P18-201ENST00000439846 1928 ntBASIC4.25□□□□□ -1.73
HLA-DPB1P04440 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DPB1P04440 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DPB1P04440 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DPB1P04440 RPL23AP27-201ENST00000415161 451 ntBASIC4.25□□□□□ -1.73
HLA-DPB1P04440 AF186996.5-201ENST00000418098 904 ntBASIC4.25□□□□□ -1.73
HLA-DPB1P04440 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.25□□□□□ -1.73
HLA-DPB1P04440 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.25□□□□□ -1.73
HLA-DPB1P04440 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.25□□□□□ -1.73
HLA-DPB1P04440 AC093414.1-201ENST00000434712 514 ntBASIC4.25□□□□□ -1.73
HLA-DPB1P04440 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.25□□□□□ -1.73
HLA-DPB1P04440 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.25□□□□□ -1.73
HLA-DPB1P04440 MYO5BP2-201ENST00000449815 1277 ntBASIC4.25□□□□□ -1.73
HLA-DPB1P04440 AC026348.1-201ENST00000462549 1053 ntBASIC4.25□□□□□ -1.73
HLA-DPB1P04440 ATP5G1P3-201ENST00000463301 410 ntBASIC4.25□□□□□ -1.73
HLA-DPB1P04440 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.25□□□□□ -1.73
HLA-DPB1P04440 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DPB1P04440 RN7SL319P-201ENST00000480656 221 ntBASIC4.25□□□□□ -1.73
HLA-DPB1P04440 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.25□□□□□ -1.73
HLA-DPB1P04440 AC016687.1-201ENST00000482574 353 ntBASIC4.25□□□□□ -1.73
HLA-DPB1P04440 AC012158.1-204ENST00000483430 465 ntBASIC4.25□□□□□ -1.73
HLA-DPB1P04440 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
HLA-DPB1P04440 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.25□□□□□ -1.73
HLA-DPB1P04440 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.25□□□□□ -1.73
HLA-DPB1P04440 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.25□□□□□ -1.73
HLA-DPB1P04440 AC016180.1-201ENST00000567945 403 ntBASIC4.25□□□□□ -1.73
HLA-DPB1P04440 AC027455.1-201ENST00000574104 594 ntBASIC4.25□□□□□ -1.73
HLA-DPB1P04440 NPM1P45-201ENST00000583151 559 ntBASIC4.25□□□□□ -1.73
HLA-DPB1P04440 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.25□□□□□ -1.73
HLA-DPB1P04440 AC087283.1-201ENST00000604029 1074 ntBASIC4.25□□□□□ -1.73
HLA-DPB1P04440 AC013244.1-201ENST00000604279 193 ntBASIC4.25□□□□□ -1.73
HLA-DPB1P04440 AC005377.1-201ENST00000605126 456 ntBASIC4.25□□□□□ -1.73
HLA-DPB1P04440 MIR6719-201ENST00000622428 87 ntBASIC4.25□□□□□ -1.73
HLA-DPB1P04440 AL359757.1-201ENST00000623176 255 ntBASIC4.25□□□□□ -1.73
HLA-DPB1P04440 AC011815.3-201ENST00000624194 473 ntBASIC4.25□□□□□ -1.73
HLA-DPB1P04440 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.25□□□□□ -1.73
HLA-DPB1P04440 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.25□□□□□ -1.73
HLA-DPB1P04440 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
HLA-DPB1P04440 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
HLA-DPB1P04440 AC120338.1-201ENST00000625074 1541 ntBASIC4.25□□□□□ -1.73
HLA-DPB1P04440 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms