Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 CDY14P-201ENST00000431260 1014 ntBASIC2.79□□□□□ -1.96
APOBP04114 HMGN2P31-201ENST00000432430 273 ntBASIC2.79□□□□□ -1.96
APOBP04114 CDY12P-201ENST00000440679 1015 ntBASIC2.79□□□□□ -1.96
APOBP04114 CDY13P-201ENST00000445813 1015 ntBASIC2.79□□□□□ -1.96
APOBP04114 CDY23P-201ENST00000451661 1014 ntBASIC2.79□□□□□ -1.96
APOBP04114 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
APOBP04114 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC2.79□□□□□ -1.96
APOBP04114 MIR7853-201ENST00000584820 132 ntBASIC2.79□□□□□ -1.96
APOBP04114 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC2.79□□□□□ -1.96
APOBP04114 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC2.79□□□□□ -1.96
APOBP04114 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
APOBP04114 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
APOBP04114 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
APOBP04114 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC2.79□□□□□ -1.96
APOBP04114 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC2.79□□□□□ -1.96
APOBP04114 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
APOBP04114 RN7SKP235-201ENST00000410662 305 ntBASIC2.79□□□□□ -1.96
APOBP04114 BX679664.2-201ENST00000439282 283 ntBASIC2.79□□□□□ -1.96
APOBP04114 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
APOBP04114 AC025164.1-201ENST00000496249 478 ntBASIC2.79□□□□□ -1.96
APOBP04114 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC2.79□□□□□ -1.96
APOBP04114 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC2.79□□□□□ -1.96
APOBP04114 AC007342.8-201ENST00000623278 678 ntBASIC2.79□□□□□ -1.96
APOBP04114 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC2.79□□□□□ -1.96
APOBP04114 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
APOBP04114 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
APOBP04114 NLN-202ENST00000502464 8354 ntTSL 5 BASIC2.79□□□□□ -1.96
APOBP04114 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC2.79□□□□□ -1.96
APOBP04114 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
APOBP04114 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
APOBP04114 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
APOBP04114 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
APOBP04114 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
APOBP04114 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC2.79□□□□□ -1.96
APOBP04114 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
APOBP04114 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
APOBP04114 FAM91A3P-201ENST00000456826 2544 ntBASIC2.78□□□□□ -1.96
APOBP04114 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
APOBP04114 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
APOBP04114 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
APOBP04114 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
APOBP04114 MYH15-201ENST00000273353 7074 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
APOBP04114 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
APOBP04114 AC126323.6-202ENST00000568092 3511 ntBASIC2.78□□□□□ -1.96
APOBP04114 RNU6-1279P-201ENST00000383917 103 ntBASIC2.78□□□□□ -1.96
APOBP04114 MIR3065-201ENST00000390137 79 ntBASIC2.78□□□□□ -1.96
APOBP04114 AL450992.3-201ENST00000413192 568 ntBASIC2.78□□□□□ -1.96
APOBP04114 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
APOBP04114 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC2.78□□□□□ -1.96
APOBP04114 AC090018.1-201ENST00000434369 367 ntBASIC2.78□□□□□ -1.96
APOBP04114 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC2.78□□□□□ -1.96
APOBP04114 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC2.78□□□□□ -1.96
APOBP04114 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC2.78□□□□□ -1.96
APOBP04114 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC2.78□□□□□ -1.96
APOBP04114 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC2.78□□□□□ -1.96
APOBP04114 IGLVVI-25-1-201ENST00000521893 249 ntBASIC2.78□□□□□ -1.96
APOBP04114 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.78□□□□□ -1.96
APOBP04114 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
APOBP04114 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC2.78□□□□□ -1.96
APOBP04114 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
APOBP04114 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
APOBP04114 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
APOBP04114 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
APOBP04114 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
APOBP04114 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC2.78□□□□□ -1.96
APOBP04114 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
APOBP04114 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
APOBP04114 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC2.78□□□□□ -1.96
APOBP04114 TFDP2-224ENST00000499676 9335 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
APOBP04114 AC008033.1-201ENST00000216407 1162 ntBASIC2.78□□□□□ -1.96
APOBP04114 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC2.78□□□□□ -1.96
APOBP04114 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC2.78□□□□□ -1.96
APOBP04114 NPM1P18-201ENST00000434232 732 ntBASIC2.78□□□□□ -1.96
APOBP04114 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC2.78□□□□□ -1.96
APOBP04114 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC2.78□□□□□ -1.96
APOBP04114 NPM1P41-201ENST00000512920 831 ntBASIC2.78□□□□□ -1.96
APOBP04114 Y_RNA.719-201ENST00000517156 106 ntBASIC2.78□□□□□ -1.96
APOBP04114 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC2.78□□□□□ -1.96
APOBP04114 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC2.78□□□□□ -1.96
APOBP04114 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.78□□□□□ -1.96
APOBP04114 AL357559.1-201ENST00000622228 274 ntBASIC2.78□□□□□ -1.96
APOBP04114 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC2.78□□□□□ -1.96
APOBP04114 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
APOBP04114 TRIM51GP-201ENST00000534741 1350 ntBASIC2.78□□□□□ -1.96
APOBP04114 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
APOBP04114 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
APOBP04114 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
APOBP04114 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
APOBP04114 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
APOBP04114 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
APOBP04114 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC2.78□□□□□ -1.96
APOBP04114 AC092681.1-201ENST00000297369 291 ntBASIC2.78□□□□□ -1.96
APOBP04114 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
APOBP04114 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
APOBP04114 MIR483-201ENST00000385070 76 ntBASIC2.78□□□□□ -1.96
APOBP04114 MIR34B-201ENST00000385076 84 ntBASIC2.78□□□□□ -1.96
APOBP04114 MIR634-201ENST00000385208 97 ntBASIC2.78□□□□□ -1.96
APOBP04114 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC2.78□□□□□ -1.96
APOBP04114 PLGLA-201ENST00000465668 449 ntBASIC2.78□□□□□ -1.96
APOBP04114 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms