Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 AC016957.2-201ENST00000616998 848 ntBASIC6.24□□□□□ -1.41
COL3A1P02461 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC6.24□□□□□ -1.41
COL3A1P02461 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL3A1P02461 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL3A1P02461 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC6.24□□□□□ -1.41
COL3A1P02461 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL3A1P02461 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.24□□□□□ -1.41
COL3A1P02461 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
COL3A1P02461 AL137141.1-201ENST00000624622 4836 ntBASIC6.24□□□□□ -1.41
COL3A1P02461 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL3A1P02461 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL3A1P02461 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC6.24□□□□□ -1.41
COL3A1P02461 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC6.24□□□□□ -1.41
COL3A1P02461 AL592182.3-201ENST00000642132 3304 ntBASIC6.23□□□□□ -1.41
COL3A1P02461 CASC19-206ENST00000641028 1430 ntBASIC6.23□□□□□ -1.41
COL3A1P02461 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL3A1P02461 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL3A1P02461 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
COL3A1P02461 AC021146.4-201ENST00000309229 279 ntBASIC6.23□□□□□ -1.41
COL3A1P02461 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL3A1P02461 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL3A1P02461 RNU6ATAC5P-201ENST00000388104 126 ntBASIC6.23□□□□□ -1.41
COL3A1P02461 RN7SKP267-201ENST00000410381 285 ntBASIC6.23□□□□□ -1.41
COL3A1P02461 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC6.23□□□□□ -1.41
COL3A1P02461 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC6.23□□□□□ -1.41
COL3A1P02461 MTND4LP7-201ENST00000431728 294 ntBASIC6.23□□□□□ -1.41
COL3A1P02461 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC6.23□□□□□ -1.41
COL3A1P02461 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC6.23□□□□□ -1.41
COL3A1P02461 TDGF1P1-201ENST00000445734 527 ntBASIC6.23□□□□□ -1.41
COL3A1P02461 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC6.23□□□□□ -1.41
COL3A1P02461 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC6.23□□□□□ -1.41
COL3A1P02461 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC6.23□□□□□ -1.41
COL3A1P02461 RNU6ATAC28P-201ENST00000459249 118 ntBASIC6.23□□□□□ -1.41
COL3A1P02461 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL3A1P02461 AC106806.2-201ENST00000509365 500 ntBASIC6.23□□□□□ -1.41
COL3A1P02461 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC6.23□□□□□ -1.41
COL3A1P02461 MTND4LP31-201ENST00000514859 294 ntBASIC6.23□□□□□ -1.41
COL3A1P02461 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC6.23□□□□□ -1.41
COL3A1P02461 CARD16-203ENST00000525374 503 ntTSL 3 BASIC6.23□□□□□ -1.41
COL3A1P02461 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.23□□□□□ -1.41
COL3A1P02461 AP001781.1-201ENST00000530977 207 ntBASIC6.23□□□□□ -1.41
COL3A1P02461 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
COL3A1P02461 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC6.23□□□□□ -1.41
COL3A1P02461 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC6.23□□□□□ -1.41
COL3A1P02461 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC6.23□□□□□ -1.41
COL3A1P02461 U3.53-201ENST00000628922 216 ntBASIC6.23□□□□□ -1.41
COL3A1P02461 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC6.23□□□□□ -1.41
COL3A1P02461 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL3A1P02461 DDX18P5-201ENST00000534547 1306 ntBASIC6.23□□□□□ -1.41
COL3A1P02461 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL3A1P02461 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL3A1P02461 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC6.23□□□□□ -1.41
COL3A1P02461 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL3A1P02461 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC6.23□□□□□ -1.41
COL3A1P02461 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.23□□□□□ -1.41
COL3A1P02461 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC6.23□□□□□ -1.41
COL3A1P02461 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL3A1P02461 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.22□□□□□ -1.41
COL3A1P02461 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL3A1P02461 FAM3C2-201ENST00000312214 681 ntBASIC6.22□□□□□ -1.41
COL3A1P02461 RSL24D1P1-201ENST00000404972 493 ntBASIC6.22□□□□□ -1.41
COL3A1P02461 RPS3AP25-201ENST00000411660 793 ntBASIC6.22□□□□□ -1.41
COL3A1P02461 AC016397.1-201ENST00000412463 242 ntBASIC6.22□□□□□ -1.41
COL3A1P02461 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC6.22□□□□□ -1.41
COL3A1P02461 Z74021.1-201ENST00000423610 407 ntBASIC6.22□□□□□ -1.41
COL3A1P02461 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC6.22□□□□□ -1.41
COL3A1P02461 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC6.22□□□□□ -1.41
COL3A1P02461 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC6.22□□□□□ -1.41
COL3A1P02461 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC6.22□□□□□ -1.41
COL3A1P02461 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC6.22□□□□□ -1.41
COL3A1P02461 PRELID3BP5-201ENST00000508612 460 ntBASIC6.22□□□□□ -1.41
COL3A1P02461 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC6.22□□□□□ -1.41
COL3A1P02461 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC6.22□□□□□ -1.41
COL3A1P02461 C1GALT1P3-201ENST00000522049 819 ntBASIC6.22□□□□□ -1.41
COL3A1P02461 AC068831.4-201ENST00000556118 109 ntBASIC6.22□□□□□ -1.41
COL3A1P02461 AL109741.3-201ENST00000561748 592 ntBASIC6.22□□□□□ -1.41
COL3A1P02461 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC6.22□□□□□ -1.41
COL3A1P02461 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC6.22□□□□□ -1.41
COL3A1P02461 AC021106.3-201ENST00000623925 531 ntBASIC6.22□□□□□ -1.41
COL3A1P02461 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC6.22□□□□□ -1.41
COL3A1P02461 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC6.22□□□□□ -1.41
COL3A1P02461 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL3A1P02461 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.22□□□□□ -1.41
COL3A1P02461 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL3A1P02461 AL672167.1-204ENST00000641875 3017 ntBASIC6.22□□□□□ -1.41
COL3A1P02461 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL3A1P02461 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
COL3A1P02461 TET1P1-201ENST00000426627 2301 ntBASIC6.22□□□□□ -1.41
COL3A1P02461 OR14L1P-202ENST00000641545 3009 ntBASIC6.22□□□□□ -1.41
COL3A1P02461 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
COL3A1P02461 VN2R3P-201ENST00000422626 1412 ntBASIC6.22□□□□□ -1.41
COL3A1P02461 AC025574.1-201ENST00000554784 1653 ntBASIC6.22□□□□□ -1.41
COL3A1P02461 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL3A1P02461 OR56B2P-202ENST00000641377 2453 ntBASIC6.22□□□□□ -1.41
COL3A1P02461 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL3A1P02461 AC104623.2-202ENST00000623477 4002 ntBASIC6.22□□□□□ -1.41
COL3A1P02461 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL3A1P02461 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
COL3A1P02461 OR4K15-201ENST00000305051 1216 ntBASIC6.22□□□□□ -1.41
COL3A1P02461 RNU1-32P-201ENST00000363937 159 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms