Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL2A1P02458 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL2A1P02458 AC108751.5-201ENST00000492880 1336 ntBASIC5.48□□□□□ -1.53
COL2A1P02458 DDX18P5-201ENST00000534547 1306 ntBASIC5.48□□□□□ -1.53
COL2A1P02458 AC008549.2-201ENST00000333482 706 ntBASIC5.48□□□□□ -1.53
COL2A1P02458 IGKV7-3-201ENST00000357453 298 ntBASIC5.48□□□□□ -1.53
COL2A1P02458 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
COL2A1P02458 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.48□□□□□ -1.53
COL2A1P02458 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.48□□□□□ -1.53
COL2A1P02458 AL356387.2-201ENST00000422272 243 ntBASIC5.48□□□□□ -1.53
COL2A1P02458 CKS1BP6-201ENST00000424932 240 ntBASIC5.48□□□□□ -1.53
COL2A1P02458 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.48□□□□□ -1.53
COL2A1P02458 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.48□□□□□ -1.53
COL2A1P02458 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC5.48□□□□□ -1.53
COL2A1P02458 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.48□□□□□ -1.53
COL2A1P02458 AC245028.2-201ENST00000458673 253 ntBASIC5.48□□□□□ -1.53
COL2A1P02458 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.48□□□□□ -1.53
COL2A1P02458 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.48□□□□□ -1.53
COL2A1P02458 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.48□□□□□ -1.53
COL2A1P02458 AC067931.1-201ENST00000624190 671 ntBASIC5.48□□□□□ -1.53
COL2A1P02458 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC5.48□□□□□ -1.53
COL2A1P02458 AP002512.4-202ENST00000641599 4530 ntBASIC5.48□□□□□ -1.53
COL2A1P02458 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
COL2A1P02458 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL2A1P02458 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.48□□□□□ -1.53
COL2A1P02458 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL2A1P02458 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
COL2A1P02458 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.47□□□□□ -1.53
COL2A1P02458 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.47□□□□□ -1.53
COL2A1P02458 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL2A1P02458 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.47□□□□□ -1.53
COL2A1P02458 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL2A1P02458 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL2A1P02458 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL2A1P02458 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
COL2A1P02458 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL2A1P02458 AL450345.1-202ENST00000605741 3881 ntBASIC5.47□□□□□ -1.53
COL2A1P02458 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL2A1P02458 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL2A1P02458 RNU6-673P-201ENST00000365084 104 ntBASIC5.47□□□□□ -1.53
COL2A1P02458 SNORA5.1-201ENST00000384275 131 ntBASIC5.47□□□□□ -1.53
COL2A1P02458 AL445189.1-201ENST00000405722 338 ntBASIC5.47□□□□□ -1.53
COL2A1P02458 RPS20P25-201ENST00000412447 352 ntBASIC5.47□□□□□ -1.53
COL2A1P02458 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.47□□□□□ -1.53
COL2A1P02458 Z95327.1-201ENST00000446082 482 ntBASIC5.47□□□□□ -1.53
COL2A1P02458 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.47□□□□□ -1.53
COL2A1P02458 AC104651.2-201ENST00000447549 528 ntBASIC5.47□□□□□ -1.53
COL2A1P02458 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.47□□□□□ -1.53
COL2A1P02458 RPL23AP24-201ENST00000458203 385 ntBASIC5.47□□□□□ -1.53
COL2A1P02458 AC091167.1-201ENST00000492017 396 ntBASIC5.47□□□□□ -1.53
COL2A1P02458 AC093840.1-201ENST00000511599 336 ntBASIC5.47□□□□□ -1.53
COL2A1P02458 NPM1P6-201ENST00000521088 871 ntBASIC5.47□□□□□ -1.53
COL2A1P02458 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.47□□□□□ -1.53
COL2A1P02458 CYCSP40-201ENST00000575927 294 ntBASIC5.47□□□□□ -1.53
COL2A1P02458 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.47□□□□□ -1.53
COL2A1P02458 AC090948.1-201ENST00000607464 549 ntBASIC5.47□□□□□ -1.53
COL2A1P02458 AC015914.2-201ENST00000618167 288 ntBASIC5.47□□□□□ -1.53
COL2A1P02458 NOL8P1-201ENST00000508336 3529 ntBASIC5.47□□□□□ -1.53
COL2A1P02458 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL2A1P02458 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
COL2A1P02458 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.47□□□□□ -1.53
COL2A1P02458 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL2A1P02458 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC5.47□□□□□ -1.53
COL2A1P02458 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL2A1P02458 ADAM5-202ENST00000399789 1942 ntBASIC5.47□□□□□ -1.53
COL2A1P02458 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
COL2A1P02458 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL2A1P02458 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL2A1P02458 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL2A1P02458 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
COL2A1P02458 AC025750.1-201ENST00000399891 379 ntBASIC5.46□□□□□ -1.53
COL2A1P02458 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
COL2A1P02458 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.46□□□□□ -1.53
COL2A1P02458 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.46□□□□□ -1.53
COL2A1P02458 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC5.46□□□□□ -1.53
COL2A1P02458 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC5.46□□□□□ -1.53
COL2A1P02458 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.46□□□□□ -1.53
COL2A1P02458 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.46□□□□□ -1.53
COL2A1P02458 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC5.46□□□□□ -1.53
COL2A1P02458 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.46□□□□□ -1.53
COL2A1P02458 AL035461.2-201ENST00000619201 524 ntBASIC5.46□□□□□ -1.53
COL2A1P02458 FRG1EP-201ENST00000634469 770 ntBASIC5.46□□□□□ -1.53
COL2A1P02458 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
COL2A1P02458 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
COL2A1P02458 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL2A1P02458 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL2A1P02458 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL2A1P02458 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
COL2A1P02458 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
COL2A1P02458 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
COL2A1P02458 AC011755.1-201ENST00000623763 2049 ntBASIC5.46□□□□□ -1.54
COL2A1P02458 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL2A1P02458 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
COL2A1P02458 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL2A1P02458 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
COL2A1P02458 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
COL2A1P02458 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL2A1P02458 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL2A1P02458 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.45□□□□□ -1.54
COL2A1P02458 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms