Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 RN7SL97P-201ENST00000486780 299 ntBASIC4.64□□□□□ -1.67
LMX1BO60663 RN7SL447P-201ENST00000494711 245 ntBASIC4.64□□□□□ -1.67
LMX1BO60663 MYL12BP2-201ENST00000503948 512 ntBASIC4.64□□□□□ -1.67
LMX1BO60663 SUMO2P5-201ENST00000506790 245 ntBASIC4.64□□□□□ -1.67
LMX1BO60663 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.64□□□□□ -1.67
LMX1BO60663 EIF3KP3-201ENST00000514461 639 ntBASIC4.64□□□□□ -1.67
LMX1BO60663 AC067904.2-201ENST00000517322 1283 ntBASIC4.64□□□□□ -1.67
LMX1BO60663 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.64□□□□□ -1.67
LMX1BO60663 HMGB1P46-201ENST00000520062 610 ntBASIC4.64□□□□□ -1.67
LMX1BO60663 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.64□□□□□ -1.67
LMX1BO60663 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.64□□□□□ -1.67
LMX1BO60663 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.64□□□□□ -1.67
LMX1BO60663 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LMX1BO60663 EIF1P5-201ENST00000585002 234 ntBASIC4.64□□□□□ -1.67
LMX1BO60663 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.64□□□□□ -1.67
LMX1BO60663 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.64□□□□□ -1.67
LMX1BO60663 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.64□□□□□ -1.67
LMX1BO60663 AC084782.3-201ENST00000612282 578 ntBASIC4.64□□□□□ -1.67
LMX1BO60663 AL355493.4-201ENST00000618530 292 ntBASIC4.64□□□□□ -1.67
LMX1BO60663 AL512427.1-201ENST00000618593 349 ntBASIC4.64□□□□□ -1.67
LMX1BO60663 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.64□□□□□ -1.67
LMX1BO60663 AP002791.1-201ENST00000623291 381 ntBASIC4.64□□□□□ -1.67
LMX1BO60663 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.64□□□□□ -1.67
LMX1BO60663 AP003400.3-201ENST00000624904 346 ntBASIC4.64□□□□□ -1.67
LMX1BO60663 FRG1DP-201ENST00000635586 771 ntBASIC4.64□□□□□ -1.67
LMX1BO60663 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.64□□□□□ -1.67
LMX1BO60663 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
LMX1BO60663 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LMX1BO60663 AC079298.1-201ENST00000625026 1619 ntBASIC4.64□□□□□ -1.67
LMX1BO60663 AC005261.6-201ENST00000623072 1387 ntBASIC4.64□□□□□ -1.67
LMX1BO60663 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
LMX1BO60663 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.64□□□□□ -1.67
LMX1BO60663 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LMX1BO60663 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
LMX1BO60663 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.63□□□□□ -1.67
LMX1BO60663 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
LMX1BO60663 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.63□□□□□ -1.67
LMX1BO60663 AC012321.1-201ENST00000561622 1588 ntBASIC4.63□□□□□ -1.67
LMX1BO60663 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
LMX1BO60663 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LMX1BO60663 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
LMX1BO60663 RPL23P2-201ENST00000320371 421 ntBASIC4.63□□□□□ -1.67
LMX1BO60663 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
LMX1BO60663 MIR365B-201ENST00000362317 111 ntBASIC4.63□□□□□ -1.67
LMX1BO60663 RNU6-354P-201ENST00000383862 107 ntBASIC4.63□□□□□ -1.67
LMX1BO60663 RNU6-610P-201ENST00000384264 107 ntBASIC4.63□□□□□ -1.67
LMX1BO60663 SEPT7P8-201ENST00000413308 775 ntBASIC4.63□□□□□ -1.67
LMX1BO60663 AL592310.1-201ENST00000414330 671 ntBASIC4.63□□□□□ -1.67
LMX1BO60663 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.63□□□□□ -1.67
LMX1BO60663 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.63□□□□□ -1.67
LMX1BO60663 XKRYP1-201ENST00000423438 492 ntBASIC4.63□□□□□ -1.67
LMX1BO60663 SRSF1P1-201ENST00000424058 520 ntBASIC4.63□□□□□ -1.67
LMX1BO60663 NIPA2P1-201ENST00000426223 976 ntBASIC4.63□□□□□ -1.67
LMX1BO60663 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.63□□□□□ -1.67
LMX1BO60663 MTND2P5-201ENST00000432656 1006 ntBASIC4.63□□□□□ -1.67
LMX1BO60663 XKRYP2-201ENST00000432915 492 ntBASIC4.63□□□□□ -1.67
LMX1BO60663 AC090018.1-201ENST00000434369 367 ntBASIC4.63□□□□□ -1.67
LMX1BO60663 GSTM5P1-201ENST00000434751 660 ntBASIC4.63□□□□□ -1.67
LMX1BO60663 OR52B5P-201ENST00000435337 951 ntBASIC4.63□□□□□ -1.67
LMX1BO60663 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.63□□□□□ -1.67
LMX1BO60663 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.63□□□□□ -1.67
LMX1BO60663 AC044797.1-201ENST00000445744 679 ntBASIC4.63□□□□□ -1.67
LMX1BO60663 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.63□□□□□ -1.67
LMX1BO60663 RPL21P18-201ENST00000469899 480 ntBASIC4.63□□□□□ -1.67
LMX1BO60663 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.63□□□□□ -1.67
LMX1BO60663 RN7SL222P-201ENST00000476452 299 ntBASIC4.63□□□□□ -1.67
LMX1BO60663 RPL7P41-201ENST00000485823 957 ntBASIC4.63□□□□□ -1.67
LMX1BO60663 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.63□□□□□ -1.67
LMX1BO60663 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
LMX1BO60663 ASNSP4-201ENST00000511103 447 ntBASIC4.63□□□□□ -1.67
LMX1BO60663 AC005351.1-201ENST00000511152 786 ntBASIC4.63□□□□□ -1.67
LMX1BO60663 AC093770.1-201ENST00000511559 571 ntBASIC4.63□□□□□ -1.67
LMX1BO60663 AC098976.1-201ENST00000513014 541 ntBASIC4.63□□□□□ -1.67
LMX1BO60663 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.63□□□□□ -1.67
LMX1BO60663 OR4V1P-201ENST00000525394 1140 ntBASIC4.63□□□□□ -1.67
LMX1BO60663 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.63□□□□□ -1.67
LMX1BO60663 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.63□□□□□ -1.67
LMX1BO60663 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
LMX1BO60663 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.63□□□□□ -1.67
LMX1BO60663 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.63□□□□□ -1.67
LMX1BO60663 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.63□□□□□ -1.67
LMX1BO60663 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.63□□□□□ -1.67
LMX1BO60663 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.63□□□□□ -1.67
LMX1BO60663 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.63□□□□□ -1.67
LMX1BO60663 MIR4646-201ENST00000580775 63 ntBASIC4.63□□□□□ -1.67
LMX1BO60663 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.63□□□□□ -1.67
LMX1BO60663 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC4.63□□□□□ -1.67
LMX1BO60663 AC040904.1-201ENST00000590850 223 ntBASIC4.63□□□□□ -1.67
LMX1BO60663 AC234772.3-201ENST00000602277 528 ntBASIC4.63□□□□□ -1.67
LMX1BO60663 AC087763.1-201ENST00000603391 286 ntBASIC4.63□□□□□ -1.67
LMX1BO60663 AL450336.1-201ENST00000605180 586 ntBASIC4.63□□□□□ -1.67
LMX1BO60663 AC106052.1-201ENST00000608029 497 ntBASIC4.63□□□□□ -1.67
LMX1BO60663 AC126915.2-201ENST00000610957 190 ntBASIC4.63□□□□□ -1.67
LMX1BO60663 AC009163.6-201ENST00000612367 342 ntBASIC4.63□□□□□ -1.67
LMX1BO60663 MIR6839-201ENST00000620425 113 ntBASIC4.63□□□□□ -1.67
LMX1BO60663 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.63□□□□□ -1.67
LMX1BO60663 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.63□□□□□ -1.67
LMX1BO60663 OR52B5P-202ENST00000641118 1110 ntBASIC4.63□□□□□ -1.67
LMX1BO60663 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.63□□□□□ -1.67
LMX1BO60663 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms