Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PRKNO60260 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
PRKNO60260 AL109941.1-201ENST00000401925 229 ntBASIC4.73□□□□□ -1.65
PRKNO60260 AL589647.1-201ENST00000402485 466 ntBASIC4.73□□□□□ -1.65
PRKNO60260 AL035079.1-201ENST00000405210 287 ntBASIC4.73□□□□□ -1.65
PRKNO60260 AL390316.1-201ENST00000406279 553 ntBASIC4.73□□□□□ -1.65
PRKNO60260 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.73□□□□□ -1.65
PRKNO60260 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.73□□□□□ -1.65
PRKNO60260 AL034379.1-201ENST00000423216 253 ntBASIC4.73□□□□□ -1.65
PRKNO60260 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.73□□□□□ -1.65
PRKNO60260 AL590762.4-201ENST00000425885 253 ntBASIC4.73□□□□□ -1.65
PRKNO60260 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.73□□□□□ -1.65
PRKNO60260 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PRKNO60260 RPL12P3-201ENST00000440080 396 ntBASIC4.73□□□□□ -1.65
PRKNO60260 RPL7P61-201ENST00000451721 751 ntBASIC4.73□□□□□ -1.65
PRKNO60260 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.73□□□□□ -1.65
PRKNO60260 AC010350.1-201ENST00000504908 231 ntBASIC4.73□□□□□ -1.65
PRKNO60260 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.73□□□□□ -1.65
PRKNO60260 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PRKNO60260 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC4.73□□□□□ -1.65
PRKNO60260 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.73□□□□□ -1.65
PRKNO60260 AC020937.1-201ENST00000519677 1013 ntBASIC4.73□□□□□ -1.65
PRKNO60260 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.73□□□□□ -1.65
PRKNO60260 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.73□□□□□ -1.65
PRKNO60260 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.73□□□□□ -1.65
PRKNO60260 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.73□□□□□ -1.65
PRKNO60260 YWHAZP1-201ENST00000556286 722 ntBASIC4.73□□□□□ -1.65
PRKNO60260 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.73□□□□□ -1.65
PRKNO60260 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.73□□□□□ -1.65
PRKNO60260 OR1F2P-201ENST00000570470 933 ntBASIC4.73□□□□□ -1.65
PRKNO60260 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.73□□□□□ -1.65
PRKNO60260 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.73□□□□□ -1.65
PRKNO60260 AC105254.2-201ENST00000603636 436 ntBASIC4.73□□□□□ -1.65
PRKNO60260 AP004372.1-201ENST00000604842 844 ntBASIC4.73□□□□□ -1.65
PRKNO60260 AC005021.1-201ENST00000608730 355 ntBASIC4.73□□□□□ -1.65
PRKNO60260 AC004241.3-201ENST00000611728 517 ntBASIC4.73□□□□□ -1.65
PRKNO60260 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.73□□□□□ -1.65
PRKNO60260 AC090617.9-201ENST00000623751 147 ntBASIC4.73□□□□□ -1.65
PRKNO60260 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
PRKNO60260 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PRKNO60260 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.73□□□□□ -1.65
PRKNO60260 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PRKNO60260 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PRKNO60260 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PRKNO60260 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.73□□□□□ -1.65
PRKNO60260 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PRKNO60260 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
PRKNO60260 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PRKNO60260 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
PRKNO60260 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.73□□□□□ -1.65
PRKNO60260 SMG1P7-201ENST00000565246 2704 ntBASIC4.73□□□□□ -1.65
PRKNO60260 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PRKNO60260 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PRKNO60260 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PRKNO60260 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.72□□□□□ -1.65
PRKNO60260 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.72□□□□□ -1.65
PRKNO60260 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PRKNO60260 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
PRKNO60260 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.72□□□□□ -1.65
PRKNO60260 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.72□□□□□ -1.65
PRKNO60260 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PRKNO60260 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.72□□□□□ -1.65
PRKNO60260 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PRKNO60260 RAD1P1-201ENST00000231383 813 ntBASIC4.72□□□□□ -1.65
PRKNO60260 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
PRKNO60260 RNA5SP123-201ENST00000363244 119 ntBASIC4.72□□□□□ -1.65
PRKNO60260 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.72□□□□□ -1.65
PRKNO60260 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
PRKNO60260 RNU2-22P-201ENST00000411266 212 ntBASIC4.72□□□□□ -1.65
PRKNO60260 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.72□□□□□ -1.65
PRKNO60260 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.72□□□□□ -1.65
PRKNO60260 AC016769.2-201ENST00000414815 475 ntBASIC4.72□□□□□ -1.65
PRKNO60260 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.72□□□□□ -1.65
PRKNO60260 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PRKNO60260 DDX39BP1-205ENST00000422507 192 ntBASIC4.72□□□□□ -1.65
PRKNO60260 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.72□□□□□ -1.65
PRKNO60260 AL354766.1-201ENST00000423396 542 ntBASIC4.72□□□□□ -1.65
PRKNO60260 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.72□□□□□ -1.65
PRKNO60260 MTCYBP21-201ENST00000443300 1113 ntBASIC4.72□□□□□ -1.65
PRKNO60260 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.72□□□□□ -1.65
PRKNO60260 KNOP1P3-201ENST00000446933 426 ntBASIC4.72□□□□□ -1.65
PRKNO60260 RPL23AP23-201ENST00000452590 471 ntBASIC4.72□□□□□ -1.65
PRKNO60260 RN7SL610P-201ENST00000463845 291 ntBASIC4.72□□□□□ -1.65
PRKNO60260 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PRKNO60260 AC112518.2-201ENST00000508565 425 ntBASIC4.72□□□□□ -1.65
PRKNO60260 AC097486.1-201ENST00000515331 210 ntBASIC4.72□□□□□ -1.65
PRKNO60260 RNU5A-7P-201ENST00000515979 116 ntBASIC4.72□□□□□ -1.65
PRKNO60260 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.72□□□□□ -1.65
PRKNO60260 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
PRKNO60260 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
PRKNO60260 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.72□□□□□ -1.65
PRKNO60260 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.72□□□□□ -1.65
PRKNO60260 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.72□□□□□ -1.65
PRKNO60260 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.72□□□□□ -1.65
PRKNO60260 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.72□□□□□ -1.65
PRKNO60260 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PRKNO60260 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.72□□□□□ -1.65
PRKNO60260 RN7SL339P-201ENST00000580597 296 ntBASIC4.72□□□□□ -1.65
PRKNO60260 PRPF19P1-201ENST00000584766 898 ntBASIC4.72□□□□□ -1.65
PRKNO60260 BMS1P7-201ENST00000602440 1052 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms