Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC3.71□□□□□ -1.82
SSSCA1O60232 AC138409.2-202ENST00000507274 458 ntBASIC3.71□□□□□ -1.82
SSSCA1O60232 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC3.71□□□□□ -1.82
SSSCA1O60232 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC3.71□□□□□ -1.82
SSSCA1O60232 SSX6-203ENST00000509958 336 ntTSL 3 BASIC3.71□□□□□ -1.82
SSSCA1O60232 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC3.71□□□□□ -1.82
SSSCA1O60232 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.71□□□□□ -1.82
SSSCA1O60232 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC3.71□□□□□ -1.82
SSSCA1O60232 OR10G5P-201ENST00000532733 358 ntBASIC3.71□□□□□ -1.82
SSSCA1O60232 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.71□□□□□ -1.82
SSSCA1O60232 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC3.71□□□□□ -1.82
SSSCA1O60232 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC3.71□□□□□ -1.82
SSSCA1O60232 MIR744-201ENST00000578242 98 ntBASIC3.71□□□□□ -1.82
SSSCA1O60232 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC3.71□□□□□ -1.82
SSSCA1O60232 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC3.71□□□□□ -1.82
SSSCA1O60232 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC3.71□□□□□ -1.82
SSSCA1O60232 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC3.71□□□□□ -1.82
SSSCA1O60232 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC3.71□□□□□ -1.82
SSSCA1O60232 AC011447.4-201ENST00000587562 111 ntBASIC3.71□□□□□ -1.82
SSSCA1O60232 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC3.71□□□□□ -1.82
SSSCA1O60232 FAM27B-201ENST00000610601 213 ntBASIC3.71□□□□□ -1.82
SSSCA1O60232 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.71□□□□□ -1.82
SSSCA1O60232 ZNRD1ASP-221ENST00000637794 1074 ntBASIC3.71□□□□□ -1.82
SSSCA1O60232 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
SSSCA1O60232 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
SSSCA1O60232 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
SSSCA1O60232 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.71□□□□□ -1.82
SSSCA1O60232 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
SSSCA1O60232 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SSSCA1O60232 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.7□□□□□ -1.82
SSSCA1O60232 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SSSCA1O60232 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
SSSCA1O60232 OR52B1P-201ENST00000316506 909 ntBASIC3.7□□□□□ -1.82
SSSCA1O60232 RNU1-15P-201ENST00000353977 144 ntBASIC3.7□□□□□ -1.82
SSSCA1O60232 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.7□□□□□ -1.82
SSSCA1O60232 RN7SKP224-201ENST00000364140 325 ntBASIC3.7□□□□□ -1.82
SSSCA1O60232 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
SSSCA1O60232 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC3.7□□□□□ -1.82
SSSCA1O60232 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SSSCA1O60232 MIR513A2-201ENST00000385249 127 ntBASIC3.7□□□□□ -1.82
SSSCA1O60232 AL031985.1-201ENST00000392713 418 ntBASIC3.7□□□□□ -1.82
SSSCA1O60232 LAP3P1-201ENST00000403648 294 ntBASIC3.7□□□□□ -1.82
SSSCA1O60232 AL078604.1-201ENST00000404609 466 ntBASIC3.7□□□□□ -1.82
SSSCA1O60232 AP002530.1-201ENST00000405705 684 ntBASIC3.7□□□□□ -1.82
SSSCA1O60232 ZSCAN12P1-201ENST00000406489 419 ntBASIC3.7□□□□□ -1.82
SSSCA1O60232 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.7□□□□□ -1.82
SSSCA1O60232 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SSSCA1O60232 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC3.7□□□□□ -1.82
SSSCA1O60232 RNA5SP104-201ENST00000410989 118 ntBASIC3.7□□□□□ -1.82
SSSCA1O60232 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC3.7□□□□□ -1.82
SSSCA1O60232 AL591848.1-201ENST00000413092 322 ntBASIC3.7□□□□□ -1.82
SSSCA1O60232 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC3.7□□□□□ -1.82
SSSCA1O60232 AL513325.1-201ENST00000417716 1034 ntBASIC3.7□□□□□ -1.82
SSSCA1O60232 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.7□□□□□ -1.82
SSSCA1O60232 AC234781.4-201ENST00000419384 244 ntBASIC3.7□□□□□ -1.82
SSSCA1O60232 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC3.7□□□□□ -1.82
SSSCA1O60232 CFL1P1-202ENST00000432948 411 ntBASIC3.7□□□□□ -1.82
SSSCA1O60232 HLA-N-201ENST00000437516 135 ntBASIC3.7□□□□□ -1.82
SSSCA1O60232 RPL7P11-201ENST00000437586 658 ntBASIC3.7□□□□□ -1.82
SSSCA1O60232 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SSSCA1O60232 AC010733.1-201ENST00000451515 401 ntBASIC3.7□□□□□ -1.82
SSSCA1O60232 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SSSCA1O60232 AC135999.1-201ENST00000478962 479 ntBASIC3.7□□□□□ -1.82
SSSCA1O60232 RN7SL649P-201ENST00000496974 275 ntBASIC3.7□□□□□ -1.82
SSSCA1O60232 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC3.7□□□□□ -1.82
SSSCA1O60232 AC015795.1-201ENST00000513669 327 ntBASIC3.7□□□□□ -1.82
SSSCA1O60232 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC3.7□□□□□ -1.82
SSSCA1O60232 RPS27AP18-201ENST00000515536 459 ntBASIC3.7□□□□□ -1.82
SSSCA1O60232 RNA5SP362-201ENST00000516048 118 ntBASIC3.7□□□□□ -1.82
SSSCA1O60232 RGS5-219ENST00000528019 512 ntTSL 4 BASIC3.7□□□□□ -1.82
SSSCA1O60232 AC092490.3-201ENST00000545370 572 ntBASIC3.7□□□□□ -1.82
SSSCA1O60232 AC069240.1-201ENST00000548774 375 ntBASIC3.7□□□□□ -1.82
SSSCA1O60232 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC3.7□□□□□ -1.82
SSSCA1O60232 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.7□□□□□ -1.82
SSSCA1O60232 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC3.7□□□□□ -1.82
SSSCA1O60232 CYP4A43P-201ENST00000568156 121 ntBASIC3.7□□□□□ -1.82
SSSCA1O60232 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.7□□□□□ -1.82
SSSCA1O60232 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC3.7□□□□□ -1.82
SSSCA1O60232 AC023762.1-201ENST00000603280 584 ntBASIC3.7□□□□□ -1.82
SSSCA1O60232 AC020910.3-201ENST00000603701 874 ntBASIC3.7□□□□□ -1.82
SSSCA1O60232 AP002360.3-201ENST00000607673 710 ntBASIC3.7□□□□□ -1.82
SSSCA1O60232 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC3.7□□□□□ -1.82
SSSCA1O60232 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.7□□□□□ -1.82
SSSCA1O60232 MFSD4BP1-201ENST00000513330 1552 ntBASIC3.7□□□□□ -1.82
SSSCA1O60232 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC3.7□□□□□ -1.82
SSSCA1O60232 NXPH1-205ENST00000602349 1953 ntBASIC3.7□□□□□ -1.82
SSSCA1O60232 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
SSSCA1O60232 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
SSSCA1O60232 AC016588.2-201ENST00000632484 3021 ntBASIC3.7□□□□□ -1.82
SSSCA1O60232 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SSSCA1O60232 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SSSCA1O60232 AC011503.2-201ENST00000594230 1500 ntBASIC3.7□□□□□ -1.82
SSSCA1O60232 AC135352.1-201ENST00000506173 1418 ntBASIC3.7□□□□□ -1.82
SSSCA1O60232 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
SSSCA1O60232 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SSSCA1O60232 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SSSCA1O60232 AC027228.2-201ENST00000567141 2154 ntBASIC3.69□□□□□ -1.82
SSSCA1O60232 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SSSCA1O60232 AC011266.1-201ENST00000624119 3569 ntBASIC3.69□□□□□ -1.82
SSSCA1O60232 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms