Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 DHX9P1-201ENST00000436565 3076 ntBASIC4.84□□□□□ -1.63
KDELR3O43731 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
KDELR3O43731 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KDELR3O43731 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.83□□□□□ -1.64
KDELR3O43731 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KDELR3O43731 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KDELR3O43731 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
KDELR3O43731 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
KDELR3O43731 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KDELR3O43731 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.83□□□□□ -1.64
KDELR3O43731 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.83□□□□□ -1.64
KDELR3O43731 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
KDELR3O43731 AC053481.2-202ENST00000582394 1500 ntBASIC4.83□□□□□ -1.64
KDELR3O43731 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KDELR3O43731 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.83□□□□□ -1.64
KDELR3O43731 RBPJP2-201ENST00000618187 1444 ntBASIC4.83□□□□□ -1.64
KDELR3O43731 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KDELR3O43731 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KDELR3O43731 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KDELR3O43731 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KDELR3O43731 AL590762.2-201ENST00000395798 571 ntBASIC4.83□□□□□ -1.64
KDELR3O43731 AC233289.1-201ENST00000403700 508 ntBASIC4.83□□□□□ -1.64
KDELR3O43731 ARL4AP5-201ENST00000404372 599 ntBASIC4.83□□□□□ -1.64
KDELR3O43731 RNA5SP296-201ENST00000410523 111 ntBASIC4.83□□□□□ -1.64
KDELR3O43731 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.83□□□□□ -1.64
KDELR3O43731 FABP7P1-201ENST00000424004 391 ntBASIC4.83□□□□□ -1.64
KDELR3O43731 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.83□□□□□ -1.64
KDELR3O43731 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.83□□□□□ -1.64
KDELR3O43731 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.83□□□□□ -1.64
KDELR3O43731 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.83□□□□□ -1.64
KDELR3O43731 RHEBP2-201ENST00000450289 600 ntBASIC4.83□□□□□ -1.64
KDELR3O43731 AC079168.2-201ENST00000453977 416 ntBASIC4.83□□□□□ -1.64
KDELR3O43731 AC006967.1-201ENST00000467608 589 ntBASIC4.83□□□□□ -1.64
KDELR3O43731 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.83□□□□□ -1.64
KDELR3O43731 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.83□□□□□ -1.64
KDELR3O43731 RNU6-513P-201ENST00000516104 104 ntBASIC4.83□□□□□ -1.64
KDELR3O43731 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KDELR3O43731 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.83□□□□□ -1.64
KDELR3O43731 AL390334.1-201ENST00000556395 450 ntBASIC4.83□□□□□ -1.64
KDELR3O43731 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
KDELR3O43731 RN7SL652P-201ENST00000577769 300 ntBASIC4.83□□□□□ -1.64
KDELR3O43731 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.83□□□□□ -1.64
KDELR3O43731 AP005262.1-201ENST00000582646 997 ntBASIC4.83□□□□□ -1.64
KDELR3O43731 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.83□□□□□ -1.64
KDELR3O43731 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC4.83□□□□□ -1.64
KDELR3O43731 AC011815.3-201ENST00000624194 473 ntBASIC4.83□□□□□ -1.64
KDELR3O43731 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.83□□□□□ -1.64
KDELR3O43731 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.83□□□□□ -1.64
KDELR3O43731 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.83□□□□□ -1.64
KDELR3O43731 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KDELR3O43731 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.83□□□□□ -1.64
KDELR3O43731 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KDELR3O43731 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KDELR3O43731 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KDELR3O43731 AC025574.1-201ENST00000554784 1653 ntBASIC4.83□□□□□ -1.64
KDELR3O43731 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KDELR3O43731 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.83□□□□□ -1.64
KDELR3O43731 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KDELR3O43731 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KDELR3O43731 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KDELR3O43731 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.82□□□□□ -1.64
KDELR3O43731 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KDELR3O43731 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KDELR3O43731 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KDELR3O43731 MIR298-201ENST00000401212 88 ntBASIC4.82□□□□□ -1.64
KDELR3O43731 OR51B3P-201ENST00000412287 913 ntBASIC4.82□□□□□ -1.64
KDELR3O43731 AC097523.2-201ENST00000435551 652 ntBASIC4.82□□□□□ -1.64
KDELR3O43731 MRPL48P1-201ENST00000445390 636 ntBASIC4.82□□□□□ -1.64
KDELR3O43731 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.82□□□□□ -1.64
KDELR3O43731 AL591363.1-201ENST00000450091 483 ntBASIC4.82□□□□□ -1.64
KDELR3O43731 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.82□□□□□ -1.64
KDELR3O43731 HMGB3P16-201ENST00000508037 287 ntBASIC4.82□□□□□ -1.64
KDELR3O43731 RNU2-30P-201ENST00000516209 141 ntBASIC4.82□□□□□ -1.64
KDELR3O43731 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.82□□□□□ -1.64
KDELR3O43731 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.82□□□□□ -1.64
KDELR3O43731 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
KDELR3O43731 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.82□□□□□ -1.64
KDELR3O43731 AC025423.2-201ENST00000537570 439 ntBASIC4.82□□□□□ -1.64
KDELR3O43731 BNIP3P1-201ENST00000547295 580 ntBASIC4.82□□□□□ -1.64
KDELR3O43731 AL110118.1-201ENST00000553543 400 ntBASIC4.82□□□□□ -1.64
KDELR3O43731 DPRXP4-201ENST00000578053 568 ntBASIC4.82□□□□□ -1.64
KDELR3O43731 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC4.82□□□□□ -1.64
KDELR3O43731 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.82□□□□□ -1.64
KDELR3O43731 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KDELR3O43731 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.82□□□□□ -1.64
KDELR3O43731 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
KDELR3O43731 AL359922.3-201ENST00000624779 1670 ntBASIC4.82□□□□□ -1.64
KDELR3O43731 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
KDELR3O43731 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.82□□□□□ -1.64
KDELR3O43731 STX3-208ENST00000641815 3236 ntBASIC4.82□□□□□ -1.64
KDELR3O43731 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KDELR3O43731 AC010928.1-201ENST00000592477 1447 ntBASIC4.81□□□□□ -1.64
KDELR3O43731 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
KDELR3O43731 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.81□□□□□ -1.64
KDELR3O43731 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.81□□□□□ -1.64
KDELR3O43731 AP000542.2-201ENST00000623199 6179 ntBASIC4.81□□□□□ -1.64
KDELR3O43731 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KDELR3O43731 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KDELR3O43731 RN7SKP74-201ENST00000362849 309 ntBASIC4.81□□□□□ -1.64
KDELR3O43731 RNVU1-6-201ENST00000364688 164 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms