Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC092376.2-201ENST00000622621 4116 ntBASIC5.26□□□□□ -1.57
SMAD6O43541 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.26□□□□□ -1.57
SMAD6O43541 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
SMAD6O43541 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SMAD6O43541 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.26□□□□□ -1.57
SMAD6O43541 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SMAD6O43541 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
SMAD6O43541 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.25□□□□□ -1.57
SMAD6O43541 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SMAD6O43541 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SMAD6O43541 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.25□□□□□ -1.57
SMAD6O43541 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
SMAD6O43541 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
SMAD6O43541 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.25□□□□□ -1.57
SMAD6O43541 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
SMAD6O43541 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SMAD6O43541 RNU4-44P-201ENST00000363050 141 ntBASIC5.25□□□□□ -1.57
SMAD6O43541 RNU6-609P-201ENST00000365459 107 ntBASIC5.25□□□□□ -1.57
SMAD6O43541 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SMAD6O43541 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
SMAD6O43541 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.25□□□□□ -1.57
SMAD6O43541 RNU1-74P-201ENST00000384108 171 ntBASIC5.25□□□□□ -1.57
SMAD6O43541 CCNB2P1-201ENST00000399411 1150 ntBASIC5.25□□□□□ -1.57
SMAD6O43541 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
SMAD6O43541 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.25□□□□□ -1.57
SMAD6O43541 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.25□□□□□ -1.57
SMAD6O43541 VN1R31P-201ENST00000417498 730 ntBASIC5.25□□□□□ -1.57
SMAD6O43541 AC093162.1-201ENST00000419682 124 ntBASIC5.25□□□□□ -1.57
SMAD6O43541 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC5.25□□□□□ -1.57
SMAD6O43541 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SMAD6O43541 AL138787.1-202ENST00000437804 898 ntBASIC5.25□□□□□ -1.57
SMAD6O43541 AL445669.2-201ENST00000454425 421 ntBASIC5.25□□□□□ -1.57
SMAD6O43541 RN7SL329P-201ENST00000467740 299 ntBASIC5.25□□□□□ -1.57
SMAD6O43541 AC097484.1-201ENST00000471148 389 ntBASIC5.25□□□□□ -1.57
SMAD6O43541 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.25□□□□□ -1.57
SMAD6O43541 AP000797.2-201ENST00000475768 606 ntBASIC5.25□□□□□ -1.57
SMAD6O43541 METTL15P1-201ENST00000481421 1045 ntBASIC5.25□□□□□ -1.57
SMAD6O43541 RPS24P16-201ENST00000497294 392 ntBASIC5.25□□□□□ -1.57
SMAD6O43541 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC5.25□□□□□ -1.57
SMAD6O43541 IMPA1P1-201ENST00000510718 842 ntBASIC5.25□□□□□ -1.57
SMAD6O43541 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.25□□□□□ -1.57
SMAD6O43541 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC5.25□□□□□ -1.57
SMAD6O43541 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.25□□□□□ -1.57
SMAD6O43541 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.25□□□□□ -1.57
SMAD6O43541 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.25□□□□□ -1.57
SMAD6O43541 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.25□□□□□ -1.57
SMAD6O43541 AC092490.3-201ENST00000545370 572 ntBASIC5.25□□□□□ -1.57
SMAD6O43541 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.25□□□□□ -1.57
SMAD6O43541 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.25□□□□□ -1.57
SMAD6O43541 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.25□□□□□ -1.57
SMAD6O43541 AC005951.1-201ENST00000576706 485 ntBASIC5.25□□□□□ -1.57
SMAD6O43541 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.25□□□□□ -1.57
SMAD6O43541 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC5.25□□□□□ -1.57
SMAD6O43541 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SMAD6O43541 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.25□□□□□ -1.57
SMAD6O43541 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.25□□□□□ -1.57
SMAD6O43541 AC133644.2-201ENST00000608142 540 ntBASIC5.25□□□□□ -1.57
SMAD6O43541 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.25□□□□□ -1.57
SMAD6O43541 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SMAD6O43541 AC018926.1-201ENST00000616335 435 ntBASIC5.25□□□□□ -1.57
SMAD6O43541 AC118658.2-201ENST00000618697 459 ntBASIC5.25□□□□□ -1.57
SMAD6O43541 MIR6839-201ENST00000620425 113 ntBASIC5.25□□□□□ -1.57
SMAD6O43541 AC068870.2-201ENST00000620635 389 ntBASIC5.25□□□□□ -1.57
SMAD6O43541 AP002799.1-201ENST00000623552 423 ntBASIC5.25□□□□□ -1.57
SMAD6O43541 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.25□□□□□ -1.57
SMAD6O43541 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.25□□□□□ -1.57
SMAD6O43541 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.25□□□□□ -1.57
SMAD6O43541 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.25□□□□□ -1.57
SMAD6O43541 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.25□□□□□ -1.57
SMAD6O43541 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.25□□□□□ -1.57
SMAD6O43541 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.25□□□□□ -1.57
SMAD6O43541 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.25□□□□□ -1.57
SMAD6O43541 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.25□□□□□ -1.57
SMAD6O43541 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SMAD6O43541 HSPA8P18-201ENST00000439846 1928 ntBASIC5.25□□□□□ -1.57
SMAD6O43541 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.25□□□□□ -1.57
SMAD6O43541 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SMAD6O43541 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.24□□□□□ -1.57
SMAD6O43541 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SMAD6O43541 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SMAD6O43541 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.24□□□□□ -1.57
SMAD6O43541 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SMAD6O43541 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.24□□□□□ -1.57
SMAD6O43541 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SMAD6O43541 AP001029.2-203ENST00000589795 4910 ntBASIC5.24□□□□□ -1.57
SMAD6O43541 AC004158.1-201ENST00000564508 4319 ntBASIC5.24□□□□□ -1.57
SMAD6O43541 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.24□□□□□ -1.57
SMAD6O43541 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.24□□□□□ -1.57
SMAD6O43541 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SMAD6O43541 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SMAD6O43541 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.24□□□□□ -1.57
SMAD6O43541 AC083843.2-201ENST00000568248 6253 ntBASIC5.24□□□□□ -1.57
SMAD6O43541 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SMAD6O43541 RNA5SP305-201ENST00000362665 119 ntBASIC5.24□□□□□ -1.57
SMAD6O43541 RNU4-4P-201ENST00000364588 130 ntBASIC5.24□□□□□ -1.57
SMAD6O43541 RNU6-152P-201ENST00000384037 107 ntBASIC5.24□□□□□ -1.57
SMAD6O43541 RNA5SP241-201ENST00000391326 114 ntBASIC5.24□□□□□ -1.57
SMAD6O43541 AL356057.1-202ENST00000402263 756 ntBASIC5.24□□□□□ -1.57
SMAD6O43541 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.24□□□□□ -1.57
SMAD6O43541 LUZP4P1-201ENST00000415420 344 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms