Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TO15178 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.89□□□□□ -1.63
TO15178 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.89□□□□□ -1.63
TO15178 AC104072.1-201ENST00000568817 668 ntBASIC4.89□□□□□ -1.63
TO15178 RN7SL753P-201ENST00000581238 290 ntBASIC4.89□□□□□ -1.63
TO15178 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.89□□□□□ -1.63
TO15178 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.89□□□□□ -1.63
TO15178 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.89□□□□□ -1.63
TO15178 AC005034.4-201ENST00000603612 899 ntBASIC4.89□□□□□ -1.63
TO15178 AC012557.1-201ENST00000607115 611 ntBASIC4.89□□□□□ -1.63
TO15178 AL512329.2-201ENST00000607350 548 ntBASIC4.89□□□□□ -1.63
TO15178 AC018645.2-201ENST00000609151 472 ntBASIC4.89□□□□□ -1.63
TO15178 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.89□□□□□ -1.63
TO15178 AC109309.2-201ENST00000612597 332 ntBASIC4.89□□□□□ -1.63
TO15178 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TO15178 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.89□□□□□ -1.63
TO15178 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.89□□□□□ -1.63
TO15178 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.89□□□□□ -1.63
TO15178 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TO15178 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.89□□□□□ -1.63
TO15178 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TO15178 THAP12P5-201ENST00000405864 2275 ntBASIC4.89□□□□□ -1.63
TO15178 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TO15178 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
TO15178 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
TO15178 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TO15178 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
TO15178 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.88□□□□□ -1.63
TO15178 AC090017.1-201ENST00000548612 1779 ntBASIC4.88□□□□□ -1.63
TO15178 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TO15178 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
TO15178 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
TO15178 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TO15178 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TO15178 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
TO15178 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TO15178 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TO15178 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
TO15178 AL035405.1-201ENST00000400795 710 ntBASIC4.88□□□□□ -1.63
TO15178 NUDT19P3-201ENST00000404698 555 ntBASIC4.88□□□□□ -1.63
TO15178 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.88□□□□□ -1.63
TO15178 RNU4-27P-201ENST00000410889 139 ntBASIC4.88□□□□□ -1.63
TO15178 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.88□□□□□ -1.63
TO15178 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.88□□□□□ -1.63
TO15178 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.88□□□□□ -1.63
TO15178 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.88□□□□□ -1.63
TO15178 RPL19P16-201ENST00000433839 588 ntBASIC4.88□□□□□ -1.63
TO15178 AL353597.2-202ENST00000434901 373 ntBASIC4.88□□□□□ -1.63
TO15178 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.88□□□□□ -1.63
TO15178 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.88□□□□□ -1.63
TO15178 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
TO15178 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC4.88□□□□□ -1.63
TO15178 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.88□□□□□ -1.63
TO15178 AC107398.1-201ENST00000486904 505 ntBASIC4.88□□□□□ -1.63
TO15178 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.88□□□□□ -1.63
TO15178 RPS4XP20-201ENST00000505751 772 ntBASIC4.88□□□□□ -1.63
TO15178 AC006427.1-201ENST00000514359 712 ntBASIC4.88□□□□□ -1.63
TO15178 C1DP5-201ENST00000525775 383 ntBASIC4.88□□□□□ -1.63
TO15178 AC068339.2-201ENST00000534395 618 ntBASIC4.88□□□□□ -1.63
TO15178 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
TO15178 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.88□□□□□ -1.63
TO15178 AC006116.7-201ENST00000590141 756 ntBASIC4.88□□□□□ -1.63
TO15178 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.88□□□□□ -1.63
TO15178 AC110792.4-201ENST00000609843 298 ntBASIC4.88□□□□□ -1.63
TO15178 MIR6839-201ENST00000620425 113 ntBASIC4.88□□□□□ -1.63
TO15178 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
TO15178 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
TO15178 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.88□□□□□ -1.63
TO15178 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
TO15178 MTND5P11-201ENST00000511037 1812 ntBASIC4.88□□□□□ -1.63
TO15178 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TO15178 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.87□□□□□ -1.63
TO15178 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
TO15178 DDX18P3-201ENST00000404856 2007 ntBASIC4.87□□□□□ -1.63
TO15178 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TO15178 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TO15178 AC004817.4-201ENST00000602396 3625 ntBASIC4.87□□□□□ -1.63
TO15178 AC008079.2-201ENST00000623543 20396 ntBASIC4.87□□□□□ -1.63
TO15178 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TO15178 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
TO15178 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.87□□□□□ -1.63
TO15178 AC023421.1-201ENST00000590535 1785 ntBASIC4.87□□□□□ -1.63
TO15178 RNU6-252P-201ENST00000363232 107 ntBASIC4.87□□□□□ -1.63
TO15178 RNU4-31P-201ENST00000384211 141 ntBASIC4.87□□□□□ -1.63
TO15178 RNU6-225P-201ENST00000384613 103 ntBASIC4.87□□□□□ -1.63
TO15178 MIR105-1-201ENST00000385222 81 ntBASIC4.87□□□□□ -1.63
TO15178 AC211486.3-201ENST00000412694 621 ntBASIC4.87□□□□□ -1.63
TO15178 AL158050.1-201ENST00000416077 457 ntBASIC4.87□□□□□ -1.63
TO15178 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.87□□□□□ -1.63
TO15178 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.87□□□□□ -1.63
TO15178 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TO15178 AL161722.2-201ENST00000434731 981 ntBASIC4.87□□□□□ -1.63
TO15178 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC4.87□□□□□ -1.63
TO15178 NPM1P33-201ENST00000438918 872 ntBASIC4.87□□□□□ -1.63
TO15178 NOP56P2-201ENST00000447491 769 ntBASIC4.87□□□□□ -1.63
TO15178 OR2AF1P-201ENST00000454899 889 ntBASIC4.87□□□□□ -1.63
TO15178 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.87□□□□□ -1.63
TO15178 APOOP2-201ENST00000461561 539 ntBASIC4.87□□□□□ -1.63
TO15178 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.87□□□□□ -1.63
TO15178 RPL7P41-201ENST00000485823 957 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms