Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 RN7SKP185-201ENST00000362813 326 ntBASIC5.36□□□□□ -1.55
PCDH17O14917 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDH17O14917 SNORA5.1-201ENST00000384275 131 ntBASIC5.36□□□□□ -1.55
PCDH17O14917 MIR105-2-201ENST00000385083 81 ntBASIC5.36□□□□□ -1.55
PCDH17O14917 AL357752.1-201ENST00000412817 349 ntBASIC5.36□□□□□ -1.55
PCDH17O14917 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDH17O14917 RNGTTP1-201ENST00000420965 728 ntBASIC5.36□□□□□ -1.55
PCDH17O14917 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.36□□□□□ -1.55
PCDH17O14917 MTND2P40-201ENST00000436718 841 ntBASIC5.36□□□□□ -1.55
PCDH17O14917 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDH17O14917 AC245047.2-201ENST00000441060 530 ntBASIC5.36□□□□□ -1.55
PCDH17O14917 OR10R1P-201ENST00000441524 1141 ntBASIC5.36□□□□□ -1.55
PCDH17O14917 AC022431.1-201ENST00000450941 438 ntBASIC5.36□□□□□ -1.55
PCDH17O14917 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDH17O14917 RPS23P6-201ENST00000466136 431 ntBASIC5.36□□□□□ -1.55
PCDH17O14917 RPS12P31-201ENST00000491419 398 ntBASIC5.36□□□□□ -1.55
PCDH17O14917 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.36□□□□□ -1.55
PCDH17O14917 AC113420.1-201ENST00000507903 571 ntBASIC5.36□□□□□ -1.55
PCDH17O14917 GLUD1P3-202ENST00000508551 200 ntBASIC5.36□□□□□ -1.55
PCDH17O14917 PRELID3BP5-201ENST00000508612 460 ntBASIC5.36□□□□□ -1.55
PCDH17O14917 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.36□□□□□ -1.55
PCDH17O14917 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDH17O14917 GAPDHP62-201ENST00000515313 990 ntBASIC5.36□□□□□ -1.55
PCDH17O14917 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDH17O14917 MRPS16P1-201ENST00000523462 412 ntBASIC5.36□□□□□ -1.55
PCDH17O14917 AC083923.1-201ENST00000523708 376 ntBASIC5.36□□□□□ -1.55
PCDH17O14917 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDH17O14917 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.36□□□□□ -1.55
PCDH17O14917 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDH17O14917 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.36□□□□□ -1.55
PCDH17O14917 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.36□□□□□ -1.55
PCDH17O14917 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDH17O14917 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDH17O14917 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDH17O14917 AC096996.1-201ENST00000563813 325 ntBASIC5.36□□□□□ -1.55
PCDH17O14917 AC015720.2-201ENST00000567709 334 ntBASIC5.36□□□□□ -1.55
PCDH17O14917 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDH17O14917 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDH17O14917 ZNF92P3-201ENST00000596594 954 ntBASIC5.36□□□□□ -1.55
PCDH17O14917 AC234772.3-201ENST00000602277 528 ntBASIC5.36□□□□□ -1.55
PCDH17O14917 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDH17O14917 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDH17O14917 MIR7973-1-201ENST00000614683 76 ntBASIC5.36□□□□□ -1.55
PCDH17O14917 AC074140.1-201ENST00000621617 208 ntBASIC5.36□□□□□ -1.55
PCDH17O14917 MIR6719-201ENST00000622428 87 ntBASIC5.36□□□□□ -1.55
PCDH17O14917 AC006963.1-201ENST00000624003 1052 ntBASIC5.36□□□□□ -1.55
PCDH17O14917 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDH17O14917 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDH17O14917 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.36□□□□□ -1.55
PCDH17O14917 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.36□□□□□ -1.55
PCDH17O14917 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDH17O14917 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDH17O14917 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
PCDH17O14917 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDH17O14917 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
PCDH17O14917 AC009962.1-201ENST00000567327 3813 ntBASIC5.35□□□□□ -1.55
PCDH17O14917 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PCDH17O14917 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
PCDH17O14917 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDH17O14917 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
PCDH17O14917 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDH17O14917 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PCDH17O14917 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.35□□□□□ -1.55
PCDH17O14917 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDH17O14917 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PCDH17O14917 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
PCDH17O14917 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PCDH17O14917 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PCDH17O14917 OR9K1P-201ENST00000326513 941 ntBASIC5.35□□□□□ -1.55
PCDH17O14917 AL159987.1-201ENST00000347911 293 ntBASIC5.35□□□□□ -1.55
PCDH17O14917 IGKV7-3-201ENST00000357453 298 ntBASIC5.35□□□□□ -1.55
PCDH17O14917 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDH17O14917 RNA5SP131-201ENST00000365452 119 ntBASIC5.35□□□□□ -1.55
PCDH17O14917 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.35□□□□□ -1.55
PCDH17O14917 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDH17O14917 AC092745.2-202ENST00000411880 369 ntBASIC5.35□□□□□ -1.55
PCDH17O14917 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.35□□□□□ -1.55
PCDH17O14917 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDH17O14917 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.35□□□□□ -1.55
PCDH17O14917 AL449283.1-202ENST00000418249 604 ntBASIC5.35□□□□□ -1.55
PCDH17O14917 AL355433.1-201ENST00000422804 300 ntBASIC5.35□□□□□ -1.55
PCDH17O14917 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PCDH17O14917 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.35□□□□□ -1.55
PCDH17O14917 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDH17O14917 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.35□□□□□ -1.55
PCDH17O14917 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.35□□□□□ -1.55
PCDH17O14917 VN1R25P-201ENST00000443385 738 ntBASIC5.35□□□□□ -1.55
PCDH17O14917 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
PCDH17O14917 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.35□□□□□ -1.55
PCDH17O14917 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDH17O14917 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.35□□□□□ -1.55
PCDH17O14917 AC021146.5-201ENST00000503544 545 ntBASIC5.35□□□□□ -1.55
PCDH17O14917 AC114322.1-201ENST00000506771 926 ntBASIC5.35□□□□□ -1.55
PCDH17O14917 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDH17O14917 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.35□□□□□ -1.55
PCDH17O14917 PRELID3BP4-201ENST00000515476 571 ntBASIC5.35□□□□□ -1.55
PCDH17O14917 RN7SKP287-201ENST00000516546 266 ntBASIC5.35□□□□□ -1.55
PCDH17O14917 OR7E128P-201ENST00000532736 1024 ntBASIC5.35□□□□□ -1.55
PCDH17O14917 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.35□□□□□ -1.55
PCDH17O14917 CYP2C60P-201ENST00000566088 139 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms