Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.45□□□□□ -1.7
UPK1AO00322 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.45□□□□□ -1.7
UPK1AO00322 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.45□□□□□ -1.7
UPK1AO00322 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.45□□□□□ -1.7
UPK1AO00322 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.45□□□□□ -1.7
UPK1AO00322 RPL7P16-201ENST00000479738 738 ntBASIC4.45□□□□□ -1.7
UPK1AO00322 STMN1P2-201ENST00000508435 439 ntBASIC4.45□□□□□ -1.7
UPK1AO00322 RNA5SP446-201ENST00000515955 82 ntBASIC4.45□□□□□ -1.7
UPK1AO00322 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.45□□□□□ -1.7
UPK1AO00322 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.45□□□□□ -1.7
UPK1AO00322 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.45□□□□□ -1.7
UPK1AO00322 BGLT3-201ENST00000564523 994 ntBASIC4.45□□□□□ -1.7
UPK1AO00322 AC016180.1-201ENST00000567945 403 ntBASIC4.45□□□□□ -1.7
UPK1AO00322 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.45□□□□□ -1.7
UPK1AO00322 MIR4646-201ENST00000580775 63 ntBASIC4.45□□□□□ -1.7
UPK1AO00322 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.45□□□□□ -1.7
UPK1AO00322 AC016252.1-201ENST00000609721 474 ntBASIC4.45□□□□□ -1.7
UPK1AO00322 AL121950.1-201ENST00000624993 2077 ntBASIC4.45□□□□□ -1.7
UPK1AO00322 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
UPK1AO00322 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
UPK1AO00322 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
UPK1AO00322 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
UPK1AO00322 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
UPK1AO00322 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
UPK1AO00322 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
UPK1AO00322 CR383656.5-201ENST00000547616 1340 ntBASIC4.45□□□□□ -1.7
UPK1AO00322 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
UPK1AO00322 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.44□□□□□ -1.7
UPK1AO00322 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
UPK1AO00322 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
UPK1AO00322 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
UPK1AO00322 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
UPK1AO00322 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
UPK1AO00322 Z95327.2-201ENST00000414579 1873 ntBASIC4.44□□□□□ -1.7
UPK1AO00322 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
UPK1AO00322 AL590762.2-201ENST00000395798 571 ntBASIC4.44□□□□□ -1.7
UPK1AO00322 GLUD1P9-201ENST00000420997 1173 ntBASIC4.44□□□□□ -1.7
UPK1AO00322 OR2B7P-201ENST00000429302 934 ntBASIC4.44□□□□□ -1.7
UPK1AO00322 AL356390.1-201ENST00000455684 397 ntBASIC4.44□□□□□ -1.7
UPK1AO00322 RPS5P7-201ENST00000456664 608 ntBASIC4.44□□□□□ -1.7
UPK1AO00322 RN7SL329P-201ENST00000467740 299 ntBASIC4.44□□□□□ -1.7
UPK1AO00322 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.44□□□□□ -1.7
UPK1AO00322 AC111000.5-201ENST00000506559 1178 ntBASIC4.44□□□□□ -1.7
UPK1AO00322 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.44□□□□□ -1.7
UPK1AO00322 AC091868.1-201ENST00000508746 304 ntBASIC4.44□□□□□ -1.7
UPK1AO00322 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.44□□□□□ -1.7
UPK1AO00322 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.44□□□□□ -1.7
UPK1AO00322 RNU1-6P-201ENST00000516290 144 ntBASIC4.44□□□□□ -1.7
UPK1AO00322 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.44□□□□□ -1.7
UPK1AO00322 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.44□□□□□ -1.7
UPK1AO00322 GLRXP2-201ENST00000555594 321 ntBASIC4.44□□□□□ -1.7
UPK1AO00322 AC009117.1-201ENST00000563948 554 ntBASIC4.44□□□□□ -1.7
UPK1AO00322 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
UPK1AO00322 AC013244.1-201ENST00000604279 193 ntBASIC4.44□□□□□ -1.7
UPK1AO00322 AC244517.3-201ENST00000616254 1235 ntBASIC4.44□□□□□ -1.7
UPK1AO00322 AC090510.2-201ENST00000617465 629 ntBASIC4.44□□□□□ -1.7
UPK1AO00322 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.44□□□□□ -1.7
UPK1AO00322 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
UPK1AO00322 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
UPK1AO00322 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
UPK1AO00322 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
UPK1AO00322 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
UPK1AO00322 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.44□□□□□ -1.7
UPK1AO00322 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
UPK1AO00322 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
UPK1AO00322 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
UPK1AO00322 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.43□□□□□ -1.7
UPK1AO00322 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
UPK1AO00322 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.43□□□□□ -1.7
UPK1AO00322 CASC19-255ENST00000641733 1385 ntBASIC4.43□□□□□ -1.7
UPK1AO00322 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.43□□□□□ -1.7
UPK1AO00322 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
UPK1AO00322 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.43□□□□□ -1.7
UPK1AO00322 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
UPK1AO00322 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
UPK1AO00322 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
UPK1AO00322 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.43□□□□□ -1.7
UPK1AO00322 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
UPK1AO00322 RNA5SP191-201ENST00000362585 102 ntBASIC4.43□□□□□ -1.7
UPK1AO00322 RN7SKP149-201ENST00000363008 344 ntBASIC4.43□□□□□ -1.7
UPK1AO00322 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.43□□□□□ -1.7
UPK1AO00322 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.43□□□□□ -1.7
UPK1AO00322 RBMY2TP-201ENST00000451162 947 ntBASIC4.43□□□□□ -1.7
UPK1AO00322 SCARNA22-201ENST00000503991 125 ntBASIC4.43□□□□□ -1.7
UPK1AO00322 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.43□□□□□ -1.7
UPK1AO00322 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.43□□□□□ -1.7
UPK1AO00322 AP000676.2-201ENST00000529711 301 ntBASIC4.43□□□□□ -1.7
UPK1AO00322 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.43□□□□□ -1.7
UPK1AO00322 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.43□□□□□ -1.7
UPK1AO00322 EDDM3DP-201ENST00000554692 434 ntBASIC4.43□□□□□ -1.7
UPK1AO00322 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.43□□□□□ -1.7
UPK1AO00322 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.43□□□□□ -1.7
UPK1AO00322 RPL7P50-201ENST00000600588 727 ntBASIC4.43□□□□□ -1.7
UPK1AO00322 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
UPK1AO00322 MIR7154-201ENST00000620673 73 ntBASIC4.43□□□□□ -1.7
UPK1AO00322 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.43□□□□□ -1.7
UPK1AO00322 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.43□□□□□ -1.7
UPK1AO00322 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
UPK1AO00322 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
UPK1AO00322 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms