Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 AL845321.1-201ENST00000444603 348 ntBASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 GAPDHP25-201ENST00000447061 1001 ntBASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 AC104651.2-201ENST00000447549 528 ntBASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 HMGB3P22-202ENST00000451823 572 ntBASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 AL691482.1-201ENST00000453255 87 ntBASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 AC110749.1-201ENST00000462007 357 ntBASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 RN7SL799P-201ENST00000475891 298 ntBASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 AC037198.2-201ENST00000478845 733 ntBASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 RPS3AP15-201ENST00000483874 781 ntBASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 AC097460.2-201ENST00000511857 741 ntBASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 AP001804.2-201ENST00000533932 910 ntBASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 RBM22P12-201ENST00000567098 1255 ntBASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 AC020978.9-201ENST00000624380 1141 ntBASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 KCNJ10-204ENST00000637644 1239 ntTSL 5 BASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC2.54□□□□□ -2
CHKB-CPT1BH3BT56 ASNSP1-204ENST00000641977 1664 ntBASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 AC090229.1-201ENST00000590983 1609 ntBASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 AC009229.4-201ENST00000623854 1947 ntBASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 RPS3A-201ENST00000274065 934 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 TMSB4XP2-201ENST00000335179 210 ntBASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 RN7SKP103-201ENST00000363848 320 ntBASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 RN7SKP59-201ENST00000410520 314 ntBASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 AL049610.1-201ENST00000423374 372 ntBASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 RBMY2JP-201ENST00000425544 1059 ntBASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 LINC00869-202ENST00000430442 1065 ntTSL 5 BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 AL359265.2-201ENST00000434367 631 ntBASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 OR6D1P-201ENST00000436165 939 ntBASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 AC023141.3-201ENST00000436698 278 ntBASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 AF228730.2-201ENST00000438784 848 ntBASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 RPL6P30-201ENST00000443382 862 ntBASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 GAS5-223ENST00000452197 483 ntTSL 3 BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 NPM1P9-201ENST00000453156 844 ntBASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 RN7SL372P-201ENST00000461982 298 ntBASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 APOA2-207ENST00000470459 416 ntTSL 5 BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 RN7SL481P-201ENST00000477764 299 ntBASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 AC058823.1-201ENST00000485315 474 ntBASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 RN7SL445P-201ENST00000495609 293 ntBASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 TRAV31-201ENST00000502780 342 ntBASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 UCHL1-AS1-202ENST00000510073 451 ntTSL 3 BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 SCARNA18.1-201ENST00000516330 83 ntBASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 RNA5SP143-201ENST00000516936 115 ntBASIC2.53□□□□□ -2
CHKB-CPT1BH3BT56 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms