Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AL713998.2-201ENST00000604538 1198 ntBASIC5.77□□□□□ -1.49
CLIP2Q9UDT6 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.77□□□□□ -1.49
CLIP2Q9UDT6 AC126323.6-202ENST00000568092 3511 ntBASIC5.77□□□□□ -1.49
CLIP2Q9UDT6 AC021242.1-201ENST00000507315 2035 ntBASIC5.77□□□□□ -1.49
CLIP2Q9UDT6 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.77□□□□□ -1.49
CLIP2Q9UDT6 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.77□□□□□ -1.49
CLIP2Q9UDT6 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLIP2Q9UDT6 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLIP2Q9UDT6 AL513548.1-201ENST00000562904 1724 ntBASIC5.77□□□□□ -1.49
CLIP2Q9UDT6 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 AL357515.1-201ENST00000402967 542 ntBASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 AC233289.1-201ENST00000403700 508 ntBASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 RN7SKP216-201ENST00000411050 312 ntBASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 MTND4LP21-201ENST00000415303 295 ntBASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 RPL26P29-201ENST00000415623 438 ntBASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 TBCAP2-201ENST00000416175 326 ntBASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 AC010733.1-201ENST00000451515 401 ntBASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 AP002371.1-201ENST00000463604 433 ntBASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 OR9N1P-201ENST00000491296 333 ntBASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 AC138938.1-201ENST00000515431 782 ntBASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 RNA5SP228-201ENST00000516232 133 ntBASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 AC137768.1-201ENST00000549998 553 ntBASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 MIR4270-201ENST00000581799 70 ntBASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 AP001005.3-201ENST00000622049 129 ntBASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLIP2Q9UDT6 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.75□□□□□ -1.49
CLIP2Q9UDT6 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CLIP2Q9UDT6 AC233968.1-201ENST00000611212 1300 ntBASIC5.75□□□□□ -1.49
CLIP2Q9UDT6 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CLIP2Q9UDT6 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLIP2Q9UDT6 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CLIP2Q9UDT6 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLIP2Q9UDT6 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
CLIP2Q9UDT6 RNVU1-6-201ENST00000364688 164 ntBASIC5.75□□□□□ -1.49
CLIP2Q9UDT6 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
CLIP2Q9UDT6 BMS1P3-201ENST00000372011 932 ntBASIC5.75□□□□□ -1.49
CLIP2Q9UDT6 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.75□□□□□ -1.49
CLIP2Q9UDT6 SNRPFP2-201ENST00000440710 251 ntBASIC5.75□□□□□ -1.49
CLIP2Q9UDT6 OR1H1P-201ENST00000448731 937 ntBASIC5.75□□□□□ -1.49
CLIP2Q9UDT6 SLC25A18P1-201ENST00000449385 454 ntBASIC5.75□□□□□ -1.49
CLIP2Q9UDT6 RBMY2TP-201ENST00000451162 947 ntBASIC5.75□□□□□ -1.49
CLIP2Q9UDT6 AC239798.3-201ENST00000454459 408 ntBASIC5.75□□□□□ -1.49
CLIP2Q9UDT6 AURKAPS2-201ENST00000454983 333 ntBASIC5.75□□□□□ -1.49
CLIP2Q9UDT6 RPS17P2-201ENST00000461663 408 ntBASIC5.75□□□□□ -1.49
CLIP2Q9UDT6 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.75□□□□□ -1.49
CLIP2Q9UDT6 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.75□□□□□ -1.49
CLIP2Q9UDT6 AP001880.2-201ENST00000538233 448 ntBASIC5.75□□□□□ -1.49
CLIP2Q9UDT6 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.75□□□□□ -1.49
CLIP2Q9UDT6 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CLIP2Q9UDT6 AL391358.1-201ENST00000605342 190 ntBASIC5.75□□□□□ -1.49
CLIP2Q9UDT6 AC007497.1-201ENST00000610421 561 ntBASIC5.75□□□□□ -1.49
CLIP2Q9UDT6 AL161616.1-201ENST00000611867 286 ntBASIC5.75□□□□□ -1.49
CLIP2Q9UDT6 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLIP2Q9UDT6 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLIP2Q9UDT6 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLIP2Q9UDT6 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.75□□□□□ -1.49
CLIP2Q9UDT6 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.75□□□□□ -1.49
CLIP2Q9UDT6 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLIP2Q9UDT6 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.74□□□□□ -1.49
CLIP2Q9UDT6 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLIP2Q9UDT6 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLIP2Q9UDT6 SNORA56-201ENST00000383966 129 ntBASIC5.74□□□□□ -1.49
CLIP2Q9UDT6 MIR137-201ENST00000385223 102 ntBASIC5.74□□□□□ -1.49
CLIP2Q9UDT6 AL589994.1-201ENST00000404962 340 ntBASIC5.74□□□□□ -1.49
CLIP2Q9UDT6 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.74□□□□□ -1.49
CLIP2Q9UDT6 OR13Z1P-201ENST00000416141 834 ntBASIC5.74□□□□□ -1.49
CLIP2Q9UDT6 QRSL1P2-201ENST00000418582 964 ntBASIC5.74□□□□□ -1.49
CLIP2Q9UDT6 OR2B7P-201ENST00000429302 934 ntBASIC5.74□□□□□ -1.49
CLIP2Q9UDT6 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.74□□□□□ -1.49
CLIP2Q9UDT6 NPM1P33-201ENST00000438918 872 ntBASIC5.74□□□□□ -1.49
CLIP2Q9UDT6 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms