Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 AL627308.1-201ENST00000435693 821 ntBASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 Z80107.2-201ENST00000445127 392 ntBASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 SUMO2P1-206ENST00000445436 284 ntBASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 OR1H1P-201ENST00000448731 937 ntBASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 AC079168.2-201ENST00000453977 416 ntBASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 AC026348.1-201ENST00000462549 1053 ntBASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 AP000942.1-201ENST00000463969 747 ntBASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 RPL23AP37-201ENST00000479658 549 ntBASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 RN7SL214P-201ENST00000487317 265 ntBASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 AC005000.1-201ENST00000536192 288 ntBASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 AC008126.1-201ENST00000549019 480 ntBASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 BGLT3-201ENST00000564523 994 ntBASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 AC015912.2-201ENST00000571053 181 ntBASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 RN7SL753P-201ENST00000581238 290 ntBASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 AC233702.9-201ENST00000581528 203 ntBASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 AL672167.1-203ENST00000641299 2975 ntBASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VPS29Q9UBQ0 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.49□□□□□ -1.69
VPS29Q9UBQ0 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS29Q9UBQ0 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS29Q9UBQ0 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS29Q9UBQ0 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS29Q9UBQ0 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
VPS29Q9UBQ0 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
VPS29Q9UBQ0 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.49□□□□□ -1.69
VPS29Q9UBQ0 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VPS29Q9UBQ0 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.49□□□□□ -1.69
VPS29Q9UBQ0 AL589647.1-201ENST00000402485 466 ntBASIC4.49□□□□□ -1.69
VPS29Q9UBQ0 AL356968.2-201ENST00000412769 1257 ntBASIC4.49□□□□□ -1.69
VPS29Q9UBQ0 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.49□□□□□ -1.69
VPS29Q9UBQ0 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS29Q9UBQ0 H2AFZP5-201ENST00000446960 382 ntBASIC4.49□□□□□ -1.69
VPS29Q9UBQ0 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.49□□□□□ -1.69
VPS29Q9UBQ0 RBMY2TP-201ENST00000451162 947 ntBASIC4.49□□□□□ -1.69
VPS29Q9UBQ0 NPM1P29-201ENST00000483112 803 ntBASIC4.49□□□□□ -1.69
VPS29Q9UBQ0 RPS4XP18-201ENST00000495480 763 ntBASIC4.49□□□□□ -1.69
VPS29Q9UBQ0 RN7SL808P-201ENST00000496066 299 ntBASIC4.49□□□□□ -1.69
VPS29Q9UBQ0 SCARNA22-201ENST00000503991 125 ntBASIC4.49□□□□□ -1.69
VPS29Q9UBQ0 BTG4P1-201ENST00000510421 183 ntBASIC4.49□□□□□ -1.69
VPS29Q9UBQ0 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS29Q9UBQ0 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS29Q9UBQ0 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS29Q9UBQ0 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS29Q9UBQ0 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS29Q9UBQ0 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.49□□□□□ -1.69
VPS29Q9UBQ0 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.49□□□□□ -1.69
VPS29Q9UBQ0 AL391358.1-201ENST00000605342 190 ntBASIC4.49□□□□□ -1.69
VPS29Q9UBQ0 AL445222.1-201ENST00000607259 628 ntBASIC4.49□□□□□ -1.69
VPS29Q9UBQ0 AC006840.1-201ENST00000623069 542 ntBASIC4.49□□□□□ -1.69
VPS29Q9UBQ0 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
VPS29Q9UBQ0 AL355852.1-201ENST00000454081 1771 ntBASIC4.49□□□□□ -1.69
VPS29Q9UBQ0 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.49□□□□□ -1.69
VPS29Q9UBQ0 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
VPS29Q9UBQ0 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS29Q9UBQ0 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.49□□□□□ -1.69
VPS29Q9UBQ0 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS29Q9UBQ0 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
VPS29Q9UBQ0 SCN1A-220ENST00000641603 12506 ntBASIC4.49□□□□□ -1.69
VPS29Q9UBQ0 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
VPS29Q9UBQ0 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VPS29Q9UBQ0 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.48□□□□□ -1.69
VPS29Q9UBQ0 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VPS29Q9UBQ0 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VPS29Q9UBQ0 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
VPS29Q9UBQ0 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
VPS29Q9UBQ0 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.48□□□□□ -1.69
VPS29Q9UBQ0 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VPS29Q9UBQ0 SNORA51.8-201ENST00000384234 132 ntBASIC4.48□□□□□ -1.69
VPS29Q9UBQ0 VDAC2P1-201ENST00000399358 958 ntBASIC4.48□□□□□ -1.69
VPS29Q9UBQ0 SPTLC1P2-201ENST00000407089 121 ntBASIC4.48□□□□□ -1.69
VPS29Q9UBQ0 OR51B3P-201ENST00000412287 913 ntBASIC4.48□□□□□ -1.69
VPS29Q9UBQ0 COX6B1P1-201ENST00000415962 213 ntBASIC4.48□□□□□ -1.69
VPS29Q9UBQ0 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.48□□□□□ -1.69
VPS29Q9UBQ0 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.48□□□□□ -1.69
VPS29Q9UBQ0 NRBF2P3-201ENST00000432731 865 ntBASIC4.48□□□□□ -1.69
VPS29Q9UBQ0 PPIAP13-201ENST00000434706 478 ntBASIC4.48□□□□□ -1.69
VPS29Q9UBQ0 NPM1P33-201ENST00000438918 872 ntBASIC4.48□□□□□ -1.69
VPS29Q9UBQ0 AL589765.3-201ENST00000446084 462 ntBASIC4.48□□□□□ -1.69
VPS29Q9UBQ0 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VPS29Q9UBQ0 RN7SL177P-201ENST00000476596 299 ntBASIC4.48□□□□□ -1.69
VPS29Q9UBQ0 RPL7P16-201ENST00000479738 738 ntBASIC4.48□□□□□ -1.69
VPS29Q9UBQ0 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
VPS29Q9UBQ0 AC110775.1-201ENST00000513721 462 ntBASIC4.48□□□□□ -1.69
VPS29Q9UBQ0 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.48□□□□□ -1.69
VPS29Q9UBQ0 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms