Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 MTND4LP24-201ENST00000572277 291 ntBASIC6.25□□□□□ -1.41
VTA1Q9NP79 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC6.25□□□□□ -1.41
VTA1Q9NP79 PCNAP1-202ENST00000595299 752 ntBASIC6.25□□□□□ -1.41
VTA1Q9NP79 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.25□□□□□ -1.41
VTA1Q9NP79 AL135786.2-201ENST00000608422 615 ntBASIC6.25□□□□□ -1.41
VTA1Q9NP79 AL121895.2-201ENST00000619558 447 ntBASIC6.25□□□□□ -1.41
VTA1Q9NP79 AC068870.2-201ENST00000620635 389 ntBASIC6.25□□□□□ -1.41
VTA1Q9NP79 AC138907.10-201ENST00000623708 983 ntBASIC6.25□□□□□ -1.41
VTA1Q9NP79 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.25□□□□□ -1.41
VTA1Q9NP79 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
VTA1Q9NP79 NLRP3P1-201ENST00000622303 1785 ntBASIC6.25□□□□□ -1.41
VTA1Q9NP79 ARHGAP42P1-201ENST00000507474 1976 ntBASIC6.25□□□□□ -1.41
VTA1Q9NP79 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
VTA1Q9NP79 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.25□□□□□ -1.41
VTA1Q9NP79 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
VTA1Q9NP79 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
VTA1Q9NP79 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
VTA1Q9NP79 AC232271.1-201ENST00000602455 2715 ntBASIC6.25□□□□□ -1.41
VTA1Q9NP79 AC005725.1-201ENST00000577346 2607 ntBASIC6.25□□□□□ -1.41
VTA1Q9NP79 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
VTA1Q9NP79 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
VTA1Q9NP79 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.25□□□□□ -1.41
VTA1Q9NP79 AC073429.2-201ENST00000569694 1444 ntBASIC6.25□□□□□ -1.41
VTA1Q9NP79 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
VTA1Q9NP79 AC022164.1-201ENST00000568767 2673 ntBASIC6.24□□□□□ -1.41
VTA1Q9NP79 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
VTA1Q9NP79 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VTA1Q9NP79 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VTA1Q9NP79 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VTA1Q9NP79 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
VTA1Q9NP79 U3.2-201ENST00000362981 210 ntBASIC6.24□□□□□ -1.41
VTA1Q9NP79 U8.4-201ENST00000363626 134 ntBASIC6.24□□□□□ -1.41
VTA1Q9NP79 SNORD116-12-201ENST00000384468 92 ntBASIC6.24□□□□□ -1.41
VTA1Q9NP79 RNU6-1320P-201ENST00000390838 107 ntBASIC6.24□□□□□ -1.41
VTA1Q9NP79 RNU6-1269P-201ENST00000391139 107 ntBASIC6.24□□□□□ -1.41
VTA1Q9NP79 RPL11P3-201ENST00000395256 523 ntBASIC6.24□□□□□ -1.41
VTA1Q9NP79 AL034374.1-201ENST00000406329 351 ntBASIC6.24□□□□□ -1.41
VTA1Q9NP79 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC6.24□□□□□ -1.41
VTA1Q9NP79 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.24□□□□□ -1.41
VTA1Q9NP79 DPY19L1P2-201ENST00000426647 915 ntBASIC6.24□□□□□ -1.41
VTA1Q9NP79 RPL7P34-201ENST00000433316 712 ntBASIC6.24□□□□□ -1.41
VTA1Q9NP79 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.24□□□□□ -1.41
VTA1Q9NP79 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.24□□□□□ -1.41
VTA1Q9NP79 RNU6-599P-201ENST00000459383 107 ntBASIC6.24□□□□□ -1.41
VTA1Q9NP79 RNU6-1193P-201ENST00000459461 107 ntBASIC6.24□□□□□ -1.41
VTA1Q9NP79 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
VTA1Q9NP79 RPSAP50-201ENST00000481955 852 ntBASIC6.24□□□□□ -1.41
VTA1Q9NP79 AC069528.1-202ENST00000482888 637 ntBASIC6.24□□□□□ -1.41
VTA1Q9NP79 AC004453.1-201ENST00000487895 408 ntBASIC6.24□□□□□ -1.41
VTA1Q9NP79 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.24□□□□□ -1.41
VTA1Q9NP79 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC6.24□□□□□ -1.41
VTA1Q9NP79 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.24□□□□□ -1.41
VTA1Q9NP79 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC6.24□□□□□ -1.41
VTA1Q9NP79 H3F3BP2-201ENST00000583907 357 ntBASIC6.24□□□□□ -1.41
VTA1Q9NP79 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.24□□□□□ -1.41
VTA1Q9NP79 AC125494.3-201ENST00000602759 455 ntBASIC6.24□□□□□ -1.41
VTA1Q9NP79 STMN1P1-201ENST00000617809 440 ntBASIC6.24□□□□□ -1.41
VTA1Q9NP79 RNU6-368P-201ENST00000620928 107 ntBASIC6.24□□□□□ -1.41
VTA1Q9NP79 RNU6-538P-201ENST00000622329 107 ntBASIC6.24□□□□□ -1.41
VTA1Q9NP79 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.24□□□□□ -1.41
VTA1Q9NP79 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
VTA1Q9NP79 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VTA1Q9NP79 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VTA1Q9NP79 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VTA1Q9NP79 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.24□□□□□ -1.41
VTA1Q9NP79 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
VTA1Q9NP79 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VTA1Q9NP79 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
VTA1Q9NP79 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VTA1Q9NP79 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
VTA1Q9NP79 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
VTA1Q9NP79 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
VTA1Q9NP79 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
VTA1Q9NP79 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
VTA1Q9NP79 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.23□□□□□ -1.41
VTA1Q9NP79 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
VTA1Q9NP79 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
VTA1Q9NP79 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
VTA1Q9NP79 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
VTA1Q9NP79 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.23□□□□□ -1.41
VTA1Q9NP79 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
VTA1Q9NP79 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.23□□□□□ -1.41
VTA1Q9NP79 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
VTA1Q9NP79 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
VTA1Q9NP79 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
VTA1Q9NP79 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
VTA1Q9NP79 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.23□□□□□ -1.41
VTA1Q9NP79 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC6.23□□□□□ -1.41
VTA1Q9NP79 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.23□□□□□ -1.41
VTA1Q9NP79 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
VTA1Q9NP79 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
VTA1Q9NP79 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
VTA1Q9NP79 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC6.23□□□□□ -1.41
VTA1Q9NP79 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC6.23□□□□□ -1.41
VTA1Q9NP79 RNU6-532P-201ENST00000384318 107 ntBASIC6.23□□□□□ -1.41
VTA1Q9NP79 MIR765-201ENST00000390226 114 ntBASIC6.23□□□□□ -1.41
VTA1Q9NP79 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.23□□□□□ -1.41
VTA1Q9NP79 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
VTA1Q9NP79 AC007161.1-204ENST00000423039 460 ntBASIC6.23□□□□□ -1.41
VTA1Q9NP79 GTF2IP2-201ENST00000424290 697 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms