Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AP002345.1-201ENST00000456493 928 ntBASIC6.12□□□□□ -1.43
CD248Q9HCU0 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CD248Q9HCU0 AL122020.1-201ENST00000472287 459 ntBASIC6.12□□□□□ -1.43
CD248Q9HCU0 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CD248Q9HCU0 AC010374.1-201ENST00000503762 1237 ntBASIC6.12□□□□□ -1.43
CD248Q9HCU0 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.12□□□□□ -1.43
CD248Q9HCU0 RPL12P22-201ENST00000519073 490 ntBASIC6.12□□□□□ -1.43
CD248Q9HCU0 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.12□□□□□ -1.43
CD248Q9HCU0 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CD248Q9HCU0 OR6M2P-201ENST00000529831 871 ntBASIC6.12□□□□□ -1.43
CD248Q9HCU0 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.12□□□□□ -1.43
CD248Q9HCU0 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC6.12□□□□□ -1.43
CD248Q9HCU0 AL359219.2-201ENST00000555184 348 ntBASIC6.12□□□□□ -1.43
CD248Q9HCU0 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.12□□□□□ -1.43
CD248Q9HCU0 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.12□□□□□ -1.43
CD248Q9HCU0 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.12□□□□□ -1.43
CD248Q9HCU0 RNU4ATAC-201ENST00000580972 127 ntBASIC6.12□□□□□ -1.43
CD248Q9HCU0 AC124283.4-201ENST00000581815 456 ntBASIC6.12□□□□□ -1.43
CD248Q9HCU0 MIR3176-201ENST00000582210 90 ntBASIC6.12□□□□□ -1.43
CD248Q9HCU0 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CD248Q9HCU0 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CD248Q9HCU0 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CD248Q9HCU0 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.12□□□□□ -1.43
CD248Q9HCU0 AL590229.1-201ENST00000603497 542 ntBASIC6.12□□□□□ -1.43
CD248Q9HCU0 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
CD248Q9HCU0 AC079610.2-201ENST00000604818 690 ntBASIC6.12□□□□□ -1.43
CD248Q9HCU0 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.12□□□□□ -1.43
CD248Q9HCU0 AC009163.6-201ENST00000612367 342 ntBASIC6.12□□□□□ -1.43
CD248Q9HCU0 VN1R7P-201ENST00000619242 903 ntBASIC6.12□□□□□ -1.43
CD248Q9HCU0 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC6.12□□□□□ -1.43
CD248Q9HCU0 SAMMSON-213ENST00000641336 1521 ntBASIC6.12□□□□□ -1.43
CD248Q9HCU0 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CD248Q9HCU0 DNM1P47-203ENST00000571780 12667 ntBASIC6.12□□□□□ -1.43
CD248Q9HCU0 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.11□□□□□ -1.43
CD248Q9HCU0 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CD248Q9HCU0 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CD248Q9HCU0 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CD248Q9HCU0 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CD248Q9HCU0 AP001541.1-201ENST00000623322 1904 ntBASIC6.11□□□□□ -1.43
CD248Q9HCU0 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CD248Q9HCU0 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.11□□□□□ -1.43
CD248Q9HCU0 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CD248Q9HCU0 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CD248Q9HCU0 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CD248Q9HCU0 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CD248Q9HCU0 HDAC1P2-201ENST00000453661 1398 ntBASIC6.11□□□□□ -1.43
CD248Q9HCU0 DDX18P5-201ENST00000534547 1306 ntBASIC6.11□□□□□ -1.43
CD248Q9HCU0 SNORD1C-201ENST00000363315 78 ntBASIC6.11□□□□□ -1.43
CD248Q9HCU0 MIR421-201ENST00000365696 85 ntBASIC6.11□□□□□ -1.43
CD248Q9HCU0 Y_RNA.559-201ENST00000384686 107 ntBASIC6.11□□□□□ -1.43
CD248Q9HCU0 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CD248Q9HCU0 AC104297.1-201ENST00000393779 870 ntBASIC6.11□□□□□ -1.43
CD248Q9HCU0 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
CD248Q9HCU0 FCF1P5-201ENST00000406490 482 ntBASIC6.11□□□□□ -1.43
CD248Q9HCU0 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC6.11□□□□□ -1.43
CD248Q9HCU0 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.11□□□□□ -1.43
CD248Q9HCU0 ELOCP17-201ENST00000414751 326 ntBASIC6.11□□□□□ -1.43
CD248Q9HCU0 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.11□□□□□ -1.43
CD248Q9HCU0 RPS7P8-201ENST00000418311 581 ntBASIC6.11□□□□□ -1.43
CD248Q9HCU0 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.11□□□□□ -1.43
CD248Q9HCU0 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.11□□□□□ -1.43
CD248Q9HCU0 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC6.11□□□□□ -1.43
CD248Q9HCU0 AC098826.1-201ENST00000433943 471 ntBASIC6.11□□□□□ -1.43
CD248Q9HCU0 ISCA1P2-201ENST00000438679 421 ntBASIC6.11□□□□□ -1.43
CD248Q9HCU0 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC6.11□□□□□ -1.43
CD248Q9HCU0 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.11□□□□□ -1.43
CD248Q9HCU0 AC064862.4-201ENST00000442180 334 ntBASIC6.11□□□□□ -1.43
CD248Q9HCU0 AL512326.1-201ENST00000443050 721 ntBASIC6.11□□□□□ -1.43
CD248Q9HCU0 TXNP2-201ENST00000443918 295 ntBASIC6.11□□□□□ -1.43
CD248Q9HCU0 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.11□□□□□ -1.43
CD248Q9HCU0 HSPE1P22-201ENST00000456856 327 ntBASIC6.11□□□□□ -1.43
CD248Q9HCU0 RPS26P39-201ENST00000469206 341 ntBASIC6.11□□□□□ -1.43
CD248Q9HCU0 RN7SL177P-201ENST00000476596 299 ntBASIC6.11□□□□□ -1.43
CD248Q9HCU0 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC6.11□□□□□ -1.43
CD248Q9HCU0 LTV1P1-201ENST00000510683 1237 ntBASIC6.11□□□□□ -1.43
CD248Q9HCU0 HMGB1P47-201ENST00000511281 589 ntBASIC6.11□□□□□ -1.43
CD248Q9HCU0 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.11□□□□□ -1.43
CD248Q9HCU0 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CD248Q9HCU0 RPS27AP18-201ENST00000515536 459 ntBASIC6.11□□□□□ -1.43
CD248Q9HCU0 TMEM97P2-201ENST00000517841 403 ntBASIC6.11□□□□□ -1.43
CD248Q9HCU0 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.11□□□□□ -1.43
CD248Q9HCU0 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.11□□□□□ -1.43
CD248Q9HCU0 OR4A42P-201ENST00000531397 938 ntBASIC6.11□□□□□ -1.43
CD248Q9HCU0 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.11□□□□□ -1.43
CD248Q9HCU0 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.11□□□□□ -1.43
CD248Q9HCU0 AC079600.1-201ENST00000550326 297 ntBASIC6.11□□□□□ -1.43
CD248Q9HCU0 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.11□□□□□ -1.43
CD248Q9HCU0 DHFRP1-201ENST00000579682 559 ntBASIC6.11□□□□□ -1.43
CD248Q9HCU0 AC005242.1-201ENST00000585658 438 ntBASIC6.11□□□□□ -1.43
CD248Q9HCU0 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC6.11□□□□□ -1.43
CD248Q9HCU0 AL353621.2-201ENST00000605340 133 ntBASIC6.11□□□□□ -1.43
CD248Q9HCU0 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC6.11□□□□□ -1.43
CD248Q9HCU0 AL354976.1-201ENST00000613843 387 ntBASIC6.11□□□□□ -1.43
CD248Q9HCU0 AC018755.4-201ENST00000619715 454 ntBASIC6.11□□□□□ -1.43
CD248Q9HCU0 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC6.11□□□□□ -1.43
CD248Q9HCU0 Z69908.1-201ENST00000622603 247 ntBASIC6.11□□□□□ -1.43
CD248Q9HCU0 AL359740.1-201ENST00000624340 592 ntBASIC6.11□□□□□ -1.43
CD248Q9HCU0 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.11□□□□□ -1.43
CD248Q9HCU0 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.11□□□□□ -1.43
CD248Q9HCU0 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms