Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 TET1P1-201ENST00000426627 2301 ntBASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 AL359922.3-201ENST00000624779 1670 ntBASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 RN7SKP74-201ENST00000362849 309 ntBASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 MIR659-201ENST00000384963 97 ntBASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 ELOCP19-201ENST00000411919 318 ntBASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 HMGN2P27-201ENST00000427352 270 ntBASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 AC092017.2-201ENST00000427600 362 ntBASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 AC108463.1-201ENST00000450258 347 ntBASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 snoU13.1-201ENST00000459157 104 ntBASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 STRADBP1-201ENST00000478954 1281 ntBASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 AC090686.1-201ENST00000481577 749 ntBASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 AC073091.2-201ENST00000603205 907 ntBASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
KIAA1549Q9HCM3 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
KIAA1549Q9HCM3 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
KIAA1549Q9HCM3 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.73
KIAA1549Q9HCM3 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
KIAA1549Q9HCM3 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.21□□□□□ -1.73
KIAA1549Q9HCM3 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
KIAA1549Q9HCM3 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC4.21□□□□□ -1.74
KIAA1549Q9HCM3 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.21□□□□□ -1.74
KIAA1549Q9HCM3 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
KIAA1549Q9HCM3 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
KIAA1549Q9HCM3 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.21□□□□□ -1.74
KIAA1549Q9HCM3 CENPIP1-201ENST00000425713 902 ntBASIC4.21□□□□□ -1.74
KIAA1549Q9HCM3 RPL21P91-201ENST00000429231 479 ntBASIC4.21□□□□□ -1.74
KIAA1549Q9HCM3 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.21□□□□□ -1.74
KIAA1549Q9HCM3 YWHAZP2-201ENST00000440317 728 ntBASIC4.21□□□□□ -1.74
KIAA1549Q9HCM3 CYCSP42-201ENST00000450823 238 ntBASIC4.21□□□□□ -1.74
KIAA1549Q9HCM3 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.21□□□□□ -1.74
KIAA1549Q9HCM3 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
KIAA1549Q9HCM3 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.21□□□□□ -1.74
KIAA1549Q9HCM3 RN7SL652P-201ENST00000577769 300 ntBASIC4.21□□□□□ -1.74
KIAA1549Q9HCM3 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.21□□□□□ -1.74
KIAA1549Q9HCM3 OR8G7P-201ENST00000616658 848 ntBASIC4.21□□□□□ -1.74
KIAA1549Q9HCM3 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.21□□□□□ -1.74
KIAA1549Q9HCM3 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
KIAA1549Q9HCM3 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
KIAA1549Q9HCM3 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
KIAA1549Q9HCM3 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
KIAA1549Q9HCM3 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.21□□□□□ -1.74
KIAA1549Q9HCM3 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 SNORA71.2-201ENST00000364941 134 ntBASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 RPL23AP1-201ENST00000428990 471 ntBASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 AC092162.1-201ENST00000432828 434 ntBASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 DEFB109A-201ENST00000482450 265 ntBASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 AC008782.1-201ENST00000603386 430 ntBASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 DDX18P5-201ENST00000534547 1306 ntBASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 RPL32P3-201ENST00000359025 275 ntBASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 C4BPAP2-201ENST00000428434 478 ntBASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 RNA5SP103-201ENST00000459503 118 ntBASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 RN7SL385P-201ENST00000468873 276 ntBASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 RN7SL481P-201ENST00000477764 299 ntBASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 AC073073.1-201ENST00000493920 463 ntBASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 OR5M7P-201ENST00000526140 972 ntBASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.2□□□□□ -1.74
KIAA1549Q9HCM3 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms