Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 AL591473.1-201ENST00000464297 313 ntBASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 AC109462.1-201ENST00000491087 368 ntBASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 AC006499.3-201ENST00000506077 748 ntBASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 MTCO3P42-201ENST00000509488 518 ntBASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 MTCO3P39-201ENST00000514812 518 ntBASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 AC138938.1-201ENST00000515431 782 ntBASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 RNA5SP228-201ENST00000516232 133 ntBASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 RN7SKP66-201ENST00000516681 231 ntBASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 AL390726.5-202ENST00000564800 256 ntBASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 MEMO1P5-201ENST00000604810 406 ntBASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 AC138473.1-201ENST00000605717 526 ntBASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 MIR6886-201ENST00000619864 61 ntBASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 AC012414.7-202ENST00000622705 1090 ntBASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 AC110792.3-201ENST00000595906 1614 ntBASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 CASC19-206ENST00000641028 1430 ntBASIC4.97□□□□□ -1.61
LRRC40Q9H9A6 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.96□□□□□ -1.61
LRRC40Q9H9A6 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.96□□□□□ -1.61
LRRC40Q9H9A6 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.96□□□□□ -1.61
LRRC40Q9H9A6 AL034370.1-201ENST00000397254 1590 ntBASIC4.96□□□□□ -1.62
LRRC40Q9H9A6 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
LRRC40Q9H9A6 SNORA51.1-201ENST00000363243 140 ntBASIC4.96□□□□□ -1.62
LRRC40Q9H9A6 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
LRRC40Q9H9A6 AL357515.1-201ENST00000402967 542 ntBASIC4.96□□□□□ -1.62
LRRC40Q9H9A6 AP002530.1-201ENST00000405705 684 ntBASIC4.96□□□□□ -1.62
LRRC40Q9H9A6 NCSTNP1-201ENST00000406229 144 ntBASIC4.96□□□□□ -1.62
LRRC40Q9H9A6 GJA6P-201ENST00000415117 1042 ntBASIC4.96□□□□□ -1.62
LRRC40Q9H9A6 AC009302.1-201ENST00000417147 390 ntBASIC4.96□□□□□ -1.62
LRRC40Q9H9A6 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LRRC40Q9H9A6 AL590609.2-201ENST00000421430 368 ntBASIC4.96□□□□□ -1.62
LRRC40Q9H9A6 FHP1-201ENST00000442741 703 ntBASIC4.96□□□□□ -1.62
LRRC40Q9H9A6 MRPL48P1-201ENST00000445390 636 ntBASIC4.96□□□□□ -1.62
LRRC40Q9H9A6 RHEBP2-201ENST00000450289 600 ntBASIC4.96□□□□□ -1.62
LRRC40Q9H9A6 AP000942.1-201ENST00000463969 747 ntBASIC4.96□□□□□ -1.62
LRRC40Q9H9A6 AC005532.2-201ENST00000467154 373 ntBASIC4.96□□□□□ -1.62
LRRC40Q9H9A6 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC4.96□□□□□ -1.62
LRRC40Q9H9A6 AC008410.1-201ENST00000483777 339 ntBASIC4.96□□□□□ -1.62
LRRC40Q9H9A6 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.96□□□□□ -1.62
LRRC40Q9H9A6 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.96□□□□□ -1.62
LRRC40Q9H9A6 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.96□□□□□ -1.62
LRRC40Q9H9A6 AC013701.1-201ENST00000522657 465 ntBASIC4.96□□□□□ -1.62
LRRC40Q9H9A6 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.96□□□□□ -1.62
LRRC40Q9H9A6 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.96□□□□□ -1.62
LRRC40Q9H9A6 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.96□□□□□ -1.62
LRRC40Q9H9A6 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.96□□□□□ -1.62
LRRC40Q9H9A6 MIR3691-201ENST00000578066 90 ntBASIC4.96□□□□□ -1.62
LRRC40Q9H9A6 SNORA74C-1-201ENST00000580726 201 ntBASIC4.96□□□□□ -1.62
LRRC40Q9H9A6 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.96□□□□□ -1.62
LRRC40Q9H9A6 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.96□□□□□ -1.62
LRRC40Q9H9A6 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.96□□□□□ -1.62
LRRC40Q9H9A6 MIR6862-1-201ENST00000613016 70 ntBASIC4.96□□□□□ -1.62
LRRC40Q9H9A6 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LRRC40Q9H9A6 MIR6862-2-201ENST00000614755 70 ntBASIC4.96□□□□□ -1.62
LRRC40Q9H9A6 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LRRC40Q9H9A6 RMST_5.1-201ENST00000618704 126 ntBASIC4.96□□□□□ -1.62
LRRC40Q9H9A6 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LRRC40Q9H9A6 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LRRC40Q9H9A6 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
LRRC40Q9H9A6 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 AC107027.3-201ENST00000565095 3473 ntBASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 AC132825.1-201ENST00000463573 2247 ntBASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 DHX9P1-201ENST00000436565 3076 ntBASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 AC008549.2-201ENST00000333482 706 ntBASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 AL034403.1-201ENST00000399414 885 ntBASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 RNA5SP345-201ENST00000410646 108 ntBASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 TBCAP2-201ENST00000416175 326 ntBASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 GLUD1P9-201ENST00000420997 1173 ntBASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 NMNAT1P2-201ENST00000435192 860 ntBASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 EEF1B2P5-201ENST00000444820 548 ntBASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 AC099063.2-201ENST00000446360 662 ntBASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 CYCSP34-201ENST00000458172 304 ntBASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 AC073358.1-201ENST00000505671 684 ntBASIC4.95□□□□□ -1.62
LRRC40Q9H9A6 RN7SKP46-201ENST00000515942 234 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms