Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC135178.6-201ENST00000605314 398 ntBASIC5.44□□□□□ -1.54
EBF3Q9H4W6 AC093799.2-201ENST00000610062 578 ntBASIC5.44□□□□□ -1.54
EBF3Q9H4W6 MIR6820-201ENST00000611508 62 ntBASIC5.44□□□□□ -1.54
EBF3Q9H4W6 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.44□□□□□ -1.54
EBF3Q9H4W6 AC074276.2-201ENST00000619891 348 ntBASIC5.44□□□□□ -1.54
EBF3Q9H4W6 AP000943.4-201ENST00000622912 357 ntBASIC5.44□□□□□ -1.54
EBF3Q9H4W6 AC091953.3-201ENST00000623220 236 ntBASIC5.44□□□□□ -1.54
EBF3Q9H4W6 LINC00216-201ENST00000623548 1126 ntBASIC5.44□□□□□ -1.54
EBF3Q9H4W6 AC068787.1-201ENST00000623908 691 ntBASIC5.44□□□□□ -1.54
EBF3Q9H4W6 TMEM30CP-203ENST00000637814 1035 ntBASIC5.44□□□□□ -1.54
EBF3Q9H4W6 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
EBF3Q9H4W6 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.44□□□□□ -1.54
EBF3Q9H4W6 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
EBF3Q9H4W6 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
EBF3Q9H4W6 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
EBF3Q9H4W6 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
EBF3Q9H4W6 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
EBF3Q9H4W6 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.43□□□□□ -1.54
EBF3Q9H4W6 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
EBF3Q9H4W6 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
EBF3Q9H4W6 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
EBF3Q9H4W6 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
EBF3Q9H4W6 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
EBF3Q9H4W6 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
EBF3Q9H4W6 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.43□□□□□ -1.54
EBF3Q9H4W6 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
EBF3Q9H4W6 RNU1-146P-201ENST00000364015 165 ntBASIC5.43□□□□□ -1.54
EBF3Q9H4W6 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.43□□□□□ -1.54
EBF3Q9H4W6 MTCYBP7-201ENST00000419540 1134 ntBASIC5.43□□□□□ -1.54
EBF3Q9H4W6 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
EBF3Q9H4W6 RPL12P43-201ENST00000420608 499 ntBASIC5.43□□□□□ -1.54
EBF3Q9H4W6 RCC2P2-201ENST00000422174 918 ntBASIC5.43□□□□□ -1.54
EBF3Q9H4W6 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC5.43□□□□□ -1.54
EBF3Q9H4W6 AC104837.2-201ENST00000427236 424 ntBASIC5.43□□□□□ -1.54
EBF3Q9H4W6 NDUFB4P8-201ENST00000435351 367 ntBASIC5.43□□□□□ -1.54
EBF3Q9H4W6 LINC02210-201ENST00000444561 288 ntBASIC5.43□□□□□ -1.54
EBF3Q9H4W6 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.43□□□□□ -1.54
EBF3Q9H4W6 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
EBF3Q9H4W6 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
EBF3Q9H4W6 AC083899.1-201ENST00000454465 3819 ntBASIC5.43□□□□□ -1.54
EBF3Q9H4W6 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.43□□□□□ -1.54
EBF3Q9H4W6 AC093166.2-201ENST00000455969 1017 ntBASIC5.43□□□□□ -1.54
EBF3Q9H4W6 RNU7-157P-201ENST00000459600 66 ntBASIC5.43□□□□□ -1.54
EBF3Q9H4W6 RPS3AP41-201ENST00000462701 778 ntBASIC5.43□□□□□ -1.54
EBF3Q9H4W6 AC078857.1-201ENST00000469870 667 ntBASIC5.43□□□□□ -1.54
EBF3Q9H4W6 OR2A3P-201ENST00000493774 953 ntBASIC5.43□□□□□ -1.54
EBF3Q9H4W6 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.43□□□□□ -1.54
EBF3Q9H4W6 GOLGA5P1-201ENST00000507317 980 ntBASIC5.43□□□□□ -1.54
EBF3Q9H4W6 AC021106.1-201ENST00000509020 1058 ntBASIC5.43□□□□□ -1.54
EBF3Q9H4W6 MTCO3P28-201ENST00000513351 515 ntBASIC5.43□□□□□ -1.54
EBF3Q9H4W6 RNU6-1334P-201ENST00000516032 105 ntBASIC5.43□□□□□ -1.54
EBF3Q9H4W6 RNU6-513P-201ENST00000516104 104 ntBASIC5.43□□□□□ -1.54
EBF3Q9H4W6 RNA5SP228-201ENST00000516232 133 ntBASIC5.43□□□□□ -1.54
EBF3Q9H4W6 AC034205.1-201ENST00000520621 638 ntBASIC5.43□□□□□ -1.54
EBF3Q9H4W6 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.43□□□□□ -1.54
EBF3Q9H4W6 OR7E13P-201ENST00000526052 910 ntBASIC5.43□□□□□ -1.54
EBF3Q9H4W6 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.43□□□□□ -1.54
EBF3Q9H4W6 AC005000.1-201ENST00000536192 288 ntBASIC5.43□□□□□ -1.54
EBF3Q9H4W6 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.43□□□□□ -1.54
EBF3Q9H4W6 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.43□□□□□ -1.54
EBF3Q9H4W6 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.43□□□□□ -1.54
EBF3Q9H4W6 AC079148.1-201ENST00000565944 819 ntBASIC5.43□□□□□ -1.54
EBF3Q9H4W6 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.43□□□□□ -1.54
EBF3Q9H4W6 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.43□□□□□ -1.54
EBF3Q9H4W6 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
EBF3Q9H4W6 VN1R81P-201ENST00000602085 372 ntBASIC5.43□□□□□ -1.54
EBF3Q9H4W6 AC009027.1-201ENST00000604510 479 ntBASIC5.43□□□□□ -1.54
EBF3Q9H4W6 AC087783.2-201ENST00000605070 562 ntBASIC5.43□□□□□ -1.54
EBF3Q9H4W6 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.43□□□□□ -1.54
EBF3Q9H4W6 EIF3FP1-201ENST00000613970 806 ntBASIC5.43□□□□□ -1.54
EBF3Q9H4W6 AL163051.2-201ENST00000618976 735 ntBASIC5.43□□□□□ -1.54
EBF3Q9H4W6 AC139792.2-201ENST00000624218 587 ntBASIC5.43□□□□□ -1.54
EBF3Q9H4W6 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
EBF3Q9H4W6 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
EBF3Q9H4W6 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
EBF3Q9H4W6 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.43□□□□□ -1.54
EBF3Q9H4W6 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
EBF3Q9H4W6 MFSD8-213ENST00000641134 1327 ntBASIC5.43□□□□□ -1.54
EBF3Q9H4W6 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.43□□□□□ -1.54
EBF3Q9H4W6 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
EBF3Q9H4W6 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.43□□□□□ -1.54
EBF3Q9H4W6 GVINP1-202ENST00000531871 7271 ntBASIC5.42□□□□□ -1.54
EBF3Q9H4W6 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.42□□□□□ -1.54
EBF3Q9H4W6 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
EBF3Q9H4W6 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.42□□□□□ -1.54
EBF3Q9H4W6 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
EBF3Q9H4W6 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
EBF3Q9H4W6 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.42□□□□□ -1.54
EBF3Q9H4W6 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
EBF3Q9H4W6 AL035419.1-201ENST00000397037 564 ntBASIC5.42□□□□□ -1.54
EBF3Q9H4W6 CTSL3P-202ENST00000412179 788 ntBASIC5.42□□□□□ -1.54
EBF3Q9H4W6 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
EBF3Q9H4W6 AC092648.1-201ENST00000425870 423 ntBASIC5.42□□□□□ -1.54
EBF3Q9H4W6 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.42□□□□□ -1.54
EBF3Q9H4W6 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.42□□□□□ -1.54
EBF3Q9H4W6 AL049745.1-201ENST00000433953 286 ntBASIC5.42□□□□□ -1.54
EBF3Q9H4W6 MTND1P33-201ENST00000446251 917 ntBASIC5.42□□□□□ -1.54
EBF3Q9H4W6 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.42□□□□□ -1.54
EBF3Q9H4W6 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
EBF3Q9H4W6 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms